Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0954 |
Symbol | |
ID | 4894860 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | - |
Start bp | 937991 |
End bp | 939091 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640149616 |
Product | polysaccharide deacetylase family protein |
Protein accession | YP_001080516 |
Protein GI | 126449486 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG0726] Predicted xylanase/chitin deacetylase |
TIGRFAM ID | [TIGR01409] Tat (twin-arginine translocation) pathway signal sequence |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACGACCA ACATGTCCGA CGCGGCCGGC GCACCGGCCG CTTCATTCGC GCCCGAGCGG CGCGCGTTCC TGGCCCGTGC GAGTGGCGGG CTCGGCCTCG CGGCGGCCGG GCTCGCGCTC GGCGCGGCAG CGGCGCCGGG CCGGGCGCTC GCGGCCGGCG CCACGGCCAC CGCCGATACC GGCGCGGCGT CACCCGCCGG CGGCTCGCCG CGGCGCTCCC CCGCCGACGA GCCCGAGGCG GCGCACGGCG CGTTCTGGCC GAACGGCGCG CGGCTCGTGA TCTCGATCTC GATGCAGTTC GAGGCGGGCG GCCAGCCGCC GACGGGCGCC GACAGCCCGT TCCCGCCCGT CGACTTTCCG CCGCAGGTGC CCGTCGATCT CGCGTCCGCG ACGTGGTTCG CCTACGGCTA TCGCGAAGGC ATCCCGCGCA TGCTCGATTT GTGGGACCGG CACGGCGTGA AGGTCACCTC GCACATGATC GGCGAGGCCG TGCACCGCCG GCCGGATCTC GCCCGAGAGA TCGTCGCGCG CGGCCACGAG GCGGCCGGAC ACGGGCCGCG CTGGAGCGCG CAGTACGCAC TCCCCCGCGA CGAAGAGCGG CGCTTCCTGA TCGCCGCCCG CGAGATGGTC GAAACCGCGA CGGGCACGCG GCCCGTCGGC TACAACTGCA ACTGGCTCAG ACGCGGGCCG AACACACTGC CGCTGTTGCA GGAGCTCGGC TACCTGTACC ACATCGACGA CGTGAGCCGC GACGAGCCGT TCATCGAGCA GGTGAACGGC CAGGATTTCG TCGTCGTGCC CTACACGCTG CGCAACAACG ACATCCTGCT GATCGAAGGC CGCAACTATT CGCCCGGGCA ATTCCTCGAG CAGATCAAGC TCGACTTCGA TCAGTTGTAC GACGAAGCCG CCACGCGGCG GCGCATGATG TCGATCAGCG CGCACGACCG GATCAGCGGC ACGCCGCAGA TGGTGCGCGC GTGGGACGCG TTCCTGCGCT ACGCGCAATC GCATCCGGGC GTCGCGTTCA TGCGCAAGGA CGACATCGCC CGCCATGCAC GGCGCAGCCC GCTCACGCTG CGCGAACCCG AAACCCTCTG A
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Protein sequence | MTTNMSDAAG APAASFAPER RAFLARASGG LGLAAAGLAL GAAAAPGRAL AAGATATADT GAASPAGGSP RRSPADEPEA AHGAFWPNGA RLVISISMQF EAGGQPPTGA DSPFPPVDFP PQVPVDLASA TWFAYGYREG IPRMLDLWDR HGVKVTSHMI GEAVHRRPDL AREIVARGHE AAGHGPRWSA QYALPRDEER RFLIAAREMV ETATGTRPVG YNCNWLRRGP NTLPLLQELG YLYHIDDVSR DEPFIEQVNG QDFVVVPYTL RNNDILLIEG RNYSPGQFLE QIKLDFDQLY DEAATRRRMM SISAHDRISG TPQMVRAWDA FLRYAQSHPG VAFMRKDDIA RHARRSPLTL REPETL
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