Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0864 |
Symbol | |
ID | 4893567 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 831236 |
End bp | 831949 |
Gene Length | 714 bp |
Protein Length | 237 aa |
Translation table | 11 |
GC content | 72% |
IMG OID | 640149527 |
Product | extracytoplasmic-function sigma-70 factor |
Protein accession | YP_001080427 |
Protein GI | 126448455 |
COG category | [K] Transcription |
COG ID | [COG1595] DNA-directed RNA polymerase specialized sigma subunit, sigma24 homolog |
TIGRFAM ID | [TIGR02937] RNA polymerase sigma factor, sigma-70 family |
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Plasmid Coverage information |
Num covering plasmid clones | 10 |
Plasmid unclonability p-value | 0.0195971 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCGGAAG TGCTCGCTCG GCCGGCGCCG GCAAAACCGT TACCGATCCT CGCTTCGAAC GGGGCGTTTG CGCCCGCCGC GGCGCCCGTC TTGCGCGCGC CGTCGCGGCC TGCGGCGCGC ACGCCGGGCG CGCGCGAGCA CGGCGCGCTC GTCGATGTGC TGGTCGCGAA CCGGCCGATG CTCGTCAAGC TCGCGCGCGG CTTCGTCGGC TGCGCGAGCC GCGCGGAGGA CGTGGTGCAC GACGTGTTCG TGAAGCTCGT CGATTTTCCG AACCAGGACG CGATCCGGCA GCCCGTCGCG TACGTGACGC GGATGGTTCG CAACGCGTCG ATCGACGCGT GCCGCCGCCA GACGCTCGAG AACACCTACC ACGCGGACGA GGACGACGGC CTCGACGTGC CGTCGCCCGA GCTGTCGCCG GAGGCCGCGC TCGTCGTGCG CGACACGCTG CGCCATGTGT ACGACGCGCT CGCGCAACTG CCCGCGCGCA GCCGCGCCGC GTTCGAGATG GTGCGGCTGC GCGAGGAGAC GCTGCAGAGC GCCGCGCGCG CGCTGAACGT GTCGCAGACG CTCGTGCACT TCATGGTCCG CGACGCCGAG CGGCACTGCG TCGCGTGCGT CGACGCGTCC GAGCGCGGGC TCGCGTGCCC GGCGTTTTGC GGCGCCCGCG CGCGGACGGT AAAAAAATGC GTGCGCGATT CGTCTATCGA GTAG
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Protein sequence | MAEVLARPAP AKPLPILASN GAFAPAAAPV LRAPSRPAAR TPGAREHGAL VDVLVANRPM LVKLARGFVG CASRAEDVVH DVFVKLVDFP NQDAIRQPVA YVTRMVRNAS IDACRRQTLE NTYHADEDDG LDVPSPELSP EAALVVRDTL RHVYDALAQL PARSRAAFEM VRLREETLQS AARALNVSQT LVHFMVRDAE RHCVACVDAS ERGLACPAFC GARARTVKKC VRDSSIE
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