Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10247_0862 |
Symbol | |
ID | 4892574 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10247 |
Kingdom | Bacteria |
Replicon accession | NC_009080 |
Strand | + |
Start bp | 829437 |
End bp | 830183 |
Gene Length | 747 bp |
Protein Length | 248 aa |
Translation table | 11 |
GC content | 73% |
IMG OID | 640149525 |
Product | short chain dehydrogenase |
Protein accession | YP_001080425 |
Protein GI | 126448180 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism [R] General function prediction only |
COG ID | [COG1028] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases) |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.140204 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCGTCG CTTTCGATTT CCACGGCCGG TCGTTCCTCG TGACGGGCGC ATCGAGCGGC ATCGGCCGCG CCGCGGCCGT CGCGCTGCGC GGCGGCGGCG CGCGCGTCGT CGCCGCCGCG CGCAACGCGC GCGAGCTCGA GCGGCTCGCG CACGAAACGG GCTGCGAGCC GCTCGAGCTC GACGTCGGCT GCGATGCGTC GGTGCGCGCG GCGCTTTCCG GCGAACGGAT GCGCGATGCG TTCGACGGGC TGATCAATTG CGCGGGCGTG ACGAGCCTTG CCGCGGCGAT CGACACGACG GCCGACGAAT TCGACCGCGT GATGGCCGTC AACGCGCGCG GCGCGATGCT GGTCGCGCGG CATGTCGCGC GCGCGATGAT TCGCGCGGGG CGGGGCGGCA GCATCGTCAA CGTATCGAGC CAGGCGGCGC TCGTCGCGCT GCCGTCGCAT CTCGCCTACT GCGCGTCGAA GGCCGCGCTC GACGCGATGA CGCGCGTGCT GTGCGTGGAG CTCGGGCCGC ACGGCATTCG CGTGAACAGC GTCAACCCGA CCGTCACGCT CACGCCGATG GCCGAGCGCG CGTGGAGCGA TCCGCACGCG AGCGGGCCGA TGCTCGCGGC GATTCCGCTC GGGCGCTTTG CGCGCGTCGC GGACGTCGTC GCGCCGATCC TGTTCCTGTC GAGCGACGCG GCGGCGATGG TGAGCGGCGT CGCGCTGCCG GTGGACGGCG GCTACACCGC GCGATAG
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Protein sequence | MSVAFDFHGR SFLVTGASSG IGRAAAVALR GGGARVVAAA RNARELERLA HETGCEPLEL DVGCDASVRA ALSGERMRDA FDGLINCAGV TSLAAAIDTT ADEFDRVMAV NARGAMLVAR HVARAMIRAG RGGSIVNVSS QAALVALPSH LAYCASKAAL DAMTRVLCVE LGPHGIRVNS VNPTVTLTPM AERAWSDPHA SGPMLAAIPL GRFARVADVV APILFLSSDA AAMVSGVALP VDGGYTAR
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