| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10247_0501 |
|---|
| Symbol | |
|---|
| ID | 4892084 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10247 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_009080 |
|---|
| Strand | - |
|---|
| Start bp | 489100 |
|---|
| End bp | 490161 |
|---|
| Gene Length | 1062 bp |
|---|
| Protein Length | 353 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 640149168 |
|---|
| Product | ABC transporter, periplasmic substrate-binding protein |
|---|
| Protein accession | YP_001080071 |
|---|
| Protein GI | 126449779 |
|---|
| COG category | [P] Inorganic ion transport and metabolism |
|---|
| COG ID | [COG1840] ABC-type Fe3+ transport system, periplasmic component |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGACCGTCC GCCGTTCGCT TCTTCCGCGC TCGCCGCTCG CCGCCGTGCG TCGCGCGTGC
GCCGCCATGC TGATCCCCGT CGCGTCGCTC GCGCTGTCGC TCGGCGCATC CGCCGCGCAC
GCGCAAGACA CCGCGATCTG CTACAACTGC CCGCCCGAAT GGGCCGACTG GGCCGCGCAG
ATCGCCGCGA TCAAGCAGCG GACCGGCATT CGCGTGCCGT TCGACAACAA GAACTCGGGC
CAGGCGATCG CGCAACTGAT CGCCGAGCAG AAGAGCCCCG TCGCGGACGT CGTCTATCTC
GGCGTGTCCT CGGCGTTCCA GGCGAAGGAC AAGGGCGTCG TCGCCCCCTA CAAGCCCGCG
CACTGGAGCG ACATCCCGGC GAATCTCAAG GACCCGCAAG GCTACTGGTT CGCGATCCAC
TCCGGCACGC TCGGCTTCTT CGTCAACAAG GACGCGCTCG ACGGCAAGCC GGTGCCGCGC
ACGTGGGCCG ATCTGCTCAA GCCCGAGTAC AAGGGGATGG TCGGCTATCT CGATCCGTCG
AGCGCGTTCG TCGGCTATGC GGGCGCCGTC GCGGTGAACC AGGCGCTCGG CGGCAGCTTC
GACGATTTCC GCCCGGCGCT CGACTGGTTC CGCAAGCTGA AGGCGAACCA GCCGATCGTG
CCGAAGCAGA CCGCATACGC GCGCGTGCTG TCCGGCGAGA TTCCGATCCT GCTCGACTAC
GATTTCGACG CCTATCGCGC GAAGTACAAG GATCATGCGA ACGTCGAATT CGTGATTCCG
AAGGAAGGCA CGATCTCGGT GCCGTACGTG ATGAGCCTCG TGAAGGGCGC GCCGCACGAG
GCGAACGGCA GGAAGGTGCT CGATTTCGTG CTGTCCGACG AAGGCCAGAA GCTGTGGGCG
AACGCGTATC TGCGGCCGGT GCGCGCGCAG GCGCTCGGCG CCGACGTCGC CGCGCAGTTC
CTGCCGGCGA GCGAGTACGC GCGCGCGAAG AGCGTCGACT TCGGCAAGCT CGCGGCCGGC
CAGCAGGCGT TCGGCAAGCA GTATCTGCAA GCGATGCAAT AA
|
|---|
| Protein sequence | MTVRRSLLPR SPLAAVRRAC AAMLIPVASL ALSLGASAAH AQDTAICYNC PPEWADWAAQ
IAAIKQRTGI RVPFDNKNSG QAIAQLIAEQ KSPVADVVYL GVSSAFQAKD KGVVAPYKPA
HWSDIPANLK DPQGYWFAIH SGTLGFFVNK DALDGKPVPR TWADLLKPEY KGMVGYLDPS
SAFVGYAGAV AVNQALGGSF DDFRPALDWF RKLKANQPIV PKQTAYARVL SGEIPILLDY
DFDAYRAKYK DHANVEFVIP KEGTISVPYV MSLVKGAPHE ANGRKVLDFV LSDEGQKLWA
NAYLRPVRAQ ALGADVAAQF LPASEYARAK SVDFGKLAAG QQAFGKQYLQ AMQ
|
|---|
| |