Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_A0042 |
Symbol | rho |
ID | 4791943 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008836 |
Strand | - |
Start bp | 39618 |
End bp | 40880 |
Gene Length | 1263 bp |
Protein Length | 420 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | |
Product | transcription termination factor Rho |
Protein accession | YP_001026051 |
Protein GI | 124385334 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 0.133554 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGCATTTAT CCGAGCTCAA GTCTCTGCAC GTCTCCGAAT TGATCGAAAT GGCCAATGGT CTGGAGATCG AAAACGCGAA CCGCCTGCGC AAGCAGGAGT TGATGTTCGC CATTCTCAAA AAGCGCGCCA AGACGGGAGA AACGATCTTC GGCGACGGCA CGCTCGAAGT GCTGCCGGAC GGTTTCGGCT TCCTGCGCTC GCCGGAAATG TCGTATCTCG CGAGCACGGA CGACATCTAC ATCAGCCCGT CGCAGATCCG CCGCTTCAAT CTGCACACCG GCGACACGAT CGAAGGTGAA GTCCGCACGC CGAAGGACGG CGAGCGCTAC TTCGCGCTGG TGAAGGTCGA CAAAGTCAAC GGGCAGCCGC CCAAGGCCTC GAAACACAAG ATCATGTTCG AGAACCTCAC GCCGCTGCAC CCGAACAAGC CGCTGTCGCT CGAGCGCGAA ATGCGCGGCG AGGAAAACGT CACGGGCCGT ATCATCGACA TGATCGCCCC GATCGGCAAG GGCCAGCGCG GCCTGCTCGT CGCGTCGCCG AAGTCCGGCA AGACCGTGAT GCTCCAGCAC ATCGCGCACG CGATCAAGCA GAACCATCCG GACGTGATCC TGTTCGTGCT GCTGATCGAC GAGCGCCCCG AGGAAGTGAC CGAAATGCAG CGCTCGGTCG CCGGCGAAGT GATCGCGTCG ACGTTCGACG AACCGGCCAC GCGCCACGTG CAGGTCGCCG AAATGGTGAT CGAGAAGGCC AAGCGCCTCG TCGAGATGAA GCACGACGTC GTGATCCTGC TCGACTCGAT CACGCGTCTC GCGCGCGCCT ACAACACCGT GATCCCGGCG TCCGGCAAGG TGCTGACGGG CGGCGTCGAC GCGAACGCGC TGCAGCGCCC GAAGCGCTTC TTCGGCGCGG CGCGCAACAT CGAGGAAGGC GGCTCGCTCA CGATCATCGG CACCGCGCTG ATCGAAACCG GCAGCCGCAT GGACGACGTG ATCTACGAAG AATTCAAGGG CACCGGCAAC ATGGAAGTGC ACCTCGAGCG CCGTCTCGCG GAAAAGCGCG TCTACCCGTC GATCAACCTG AACAAGTCGG GCACGCGCCG CGAGGAAATG CTGATCAAGC CCGAGATCCT CCAGAAGATC TGGGTGCTGC GCAAATTCAT CCACGACATG GACGAAGTCG AGGCGATGGA ATTCCTGCTC GACAAGATCC GCCAGACGAA GAACAACGCC GAGTTCTTCG ATCTGATGCG CCGCGGCGGC TGA
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Protein sequence | MHLSELKSLH VSELIEMANG LEIENANRLR KQELMFAILK KRAKTGETIF GDGTLEVLPD GFGFLRSPEM SYLASTDDIY ISPSQIRRFN LHTGDTIEGE VRTPKDGERY FALVKVDKVN GQPPKASKHK IMFENLTPLH PNKPLSLERE MRGEENVTGR IIDMIAPIGK GQRGLLVASP KSGKTVMLQH IAHAIKQNHP DVILFVLLID ERPEEVTEMQ RSVAGEVIAS TFDEPATRHV QVAEMVIEKA KRLVEMKHDV VILLDSITRL ARAYNTVIPA SGKVLTGGVD ANALQRPKRF FGAARNIEEG GSLTIIGTAL IETGSRMDDV IYEEFKGTGN MEVHLERRLA EKRVYPSINL NKSGTRREEM LIKPEILQKI WVLRKFIHDM DEVEAMEFLL DKIRQTKNNA EFFDLMRRGG
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