| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_1894 |
|---|
| Symbol | |
|---|
| ID | 4790250 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008835 |
|---|
| Strand | + |
|---|
| Start bp | 1943437 |
|---|
| End bp | 1944630 |
|---|
| Gene Length | 1194 bp |
|---|
| Protein Length | 397 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 71% |
|---|
| IMG OID | |
|---|
| Product | putative amino acid ABC transporter, periplasmic amino acid-binding protein |
|---|
| Protein accession | YP_001025691 |
|---|
| Protein GI | 124382401 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 30 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTGTCGAC GGCGTCGCGC AGTCGCGCGC GCTCGCATTG CGTCGCGCGG CGTCGATAGT
GTCGATCATG TCGGAAGTGG CGGAAGTGGC GGAAGTGGCG GAAGCATCAG AAGCATCAGA
AGCATCAGGG GCATCAGGGG CATCAGAGGT ATCAGAGGTA TCAGAGGTAT CAGAGGTATC
AGAGGTATCA GAGGTATCAG AGGCGTCAGA GGCGTCAGAG GCGTCAGAGG CATTAGAAGC
ATCGGAGGCA CCGAAGCGAT GACCGACCGA CGCACATTCG TCGGCGGCGC GGCGGCCTTC
GCGGCCGCAT GGGCCGCCGC GCCGTTCGGC GCGCGCGCCG GCATCGCGGT CGATCTCGAC
CCGCGTCAGG CGGGCCGCGT GCGCGCCGAA CGCGATCCGG CCGCCGTCGA CGCCGCGCGC
CGCTACCGCT GGGTCGACGA TCGCGCGTTC ACCGTCGCGA TCGCGCCGCA TGCGCCACCC
GTCGCGACGT TCGCGACCGA CGCGCGCACC GTCGTCGGCG CGGACCCGGA CTACGCGCAA
CTCGTCGCCG ACGCGCTCGG CCGGCGGCTC GCGCTCGTGC CCGTCGCCTG GGCCGACTGG
CCGCTCGGGC TGAGCGCCGG CAAGTACGAC GCGGTGATCT CGAACGTCGG CGTCACCGAG
CAGCGCAAGC GGAAGTTCGA TTTCACGACG TACCGGCTCG GCCTGCACGG CTTCTATGTG
CGGGCCGCGA GCCCGATCGC GCGGATCGCC GCGCCGCGCG ACGTGGCGGG CCTGCGGATC
ATCACCGCGT CGGGAACGAG CCAGGAGCGC ATCCTGCTCG AATGGGACCG GCGCAACGTC
GCGCAGCGGC TCAAGCCGGT GGACGTGCTG TACTTCGACG ACGACGCCGC ATCGCGCGTC
GCGCTGCTCT CGGGGCGCGC CGACGCGGAG CTGAATCCGA ACGCGACACT CGCGTACCAG
GCGGCGCGCG ACGGCAGGAT TCGTTGCGTC GGCAACGTGA ACGCGGGCTG GCCGCTCAAG
GCCGACGTCG CGATCGCGAC GCGCAAGGGC AGCGGCCTCG CCGACGCGCT CACGCTCGCG
ACCAACGGCC TGATCCGCAA CGGCAAGTAC CGGCAGGCGC TCGCGCGATG GGGGCTGCTG
TCGGAGGCGC TCGACCGGTC GGAGACGAAT CCGGCGGGGC TGCCGTCGTT CTGA
|
|---|
| Protein sequence | MCRRRRAVAR ARIASRGVDS VDHVGSGGSG GSGGSIRSIR SIRGIRGIRG IRGIRGIRGI
RGIRGIRGVR GVRGVRGIRS IGGTEAMTDR RTFVGGAAAF AAAWAAAPFG ARAGIAVDLD
PRQAGRVRAE RDPAAVDAAR RYRWVDDRAF TVAIAPHAPP VATFATDART VVGADPDYAQ
LVADALGRRL ALVPVAWADW PLGLSAGKYD AVISNVGVTE QRKRKFDFTT YRLGLHGFYV
RAASPIARIA APRDVAGLRI ITASGTSQER ILLEWDRRNV AQRLKPVDVL YFDDDAASRV
ALLSGRADAE LNPNATLAYQ AARDGRIRCV GNVNAGWPLK ADVAIATRKG SGLADALTLA
TNGLIRNGKY RQALARWGLL SEALDRSETN PAGLPSF
|
|---|
| |