Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BMA10229_1724 |
Symbol | oppA |
ID | 4789631 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Burkholderia mallei NCTC 10229 |
Kingdom | Bacteria |
Replicon accession | NC_008835 |
Strand | + |
Start bp | 1768325 |
End bp | 1769989 |
Gene Length | 1665 bp |
Protein Length | 554 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | |
Product | oligopeptide ABC transporter, periplasmic oligopeptide-binding protein |
Protein accession | YP_001025522 |
Protein GI | 124382112 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 21 |
Plasmid unclonability p-value | 0.532344 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGCGCCGCG CGTTGCCATT CCGCTACCAC TATCAATCGC ACACGATGAA ACACACGCAT GCCTTCGCGG CCGTGCTGGC CGCGCTCGCC CTGACGATCG CGCCATCCGC CCCGGCCGTC ACCGTTGCCT CGAATGTCAC GCTCGCGGAT CAGCAGGACC TCACGCGGCA GGTGCCCGCG GAGGTCGAAT CGCTCGACCC CGCGCACATC GAATCGTGGA CCGGCAACAC GATCGGCCTG GATCTGTTCG AGGGGCTCGC GCGCATCGAC GCGAGCGGGG CGGTGGTGCC GGGCGTCGCG CAGGCGTGGG AGCACAAGGC GCCGGATACG TGGATCTTCA AGCTGCGCCG CGACGCGAAG TGGAGCAACG GGCAGCCCGT GACGGCCGCG GATTTCGTAT ACGCGTGGCA GCGTCTCGCC GATCCGAAGA CGGGTTCGAA ATACACGATC CTCGTCGAGT TTGTGAAGAA CGCCTCGGCG ATCATCGCGG GCAAGCAGCC GCCCGGCGAT CTCGGCATTC GCGCGATCGA TCCGTACACG ATCGAGGTGA AGACCGAGGT GCCCGTGTCG TATTTCCCCG AGCTCACCGC GATGGCGCCG CTCACCCCCG TGAACAAGGA CGCGGTCGCG AAGTTCGGCG ACGCATGGAC GCGCCCGAAG AACATCGTGA GCAACGGCCC TTACACGCTC GTCGACTGGC AGCCGAACAA CCGGATCGTG ATGGCGAAGA GCGACAAGTA CTGGAACGCG CGCAACGTCG TGATCCGCAA GGTGACGTAC CTGCCGATCG AGAACGACGA GACCGCGCTG CGGATGTACC AGGCGGGCCA GATCGACTAC ACGTATTCGA TTCCCGCGGG CGGCTTCGGC CAGATCAGCA AGCAGTTCGG CAAGGAGCTG CGCCCGGGGC TGCAGCTCGC GACGTATTAC TACTACCTGA AGAACAGCGA TCCGGCGCTC AAGGACAAGC GCGTGCGCGA AGCGCTCGCG ATGGTGCTCG ACCGCGAGAT CCTCACGTCG AAGATCACGC AGGCGGGCGA AGTGCCGATG TACGGGCTGA TGCCGAAGGG CGTGAAGGGC GTGCAGCGGC CGTTCACGCC GGACTGGGCG TCGTGGCCGA TGGCGAGGCG CGTCGACTAC GCGAAGAACC TGCTGAAGCA GGCGGGCCAT GGCGACGCGA ATCCGCTCAC GTTCACGCTG ACCTACAACA CGAACGACCT GCACAAGAAG GTCGCGCTGT TCGCGGCGTC CGAATGGCGC ACGAAGCTCG GCGTGACGGC GAAGCTCGAG AACGTCGAGT TCAAGGTGCT GATGAAGCAG CGCCACGACG GCAAGGTGCA GGTCGCGCGC GACGGCTGGT TCGCCGACTA CAACGACGCG ATGACGTTCT TCGACCTGAT CCGCTGCGGC AGCTCGCAGA ACACGGTCGG CTACTGCAAC CCGAAGGTCG ATTCGCTCGT CGCCGAGGCG AACCAGAAGC TCGATGACGG CGCGCGCGCG GCGCTGCTCA CGCAGGCGCA CGATCTCGCG ATGAACGACT ATCCGATGGT GCCGCTCTTC CAGTATTCGG CGGACCGCCT CGTGAAGTCG TACGTCGGCG GCTACACGCT GACGAACTAC ATCGACATGC GCGCCTCGCA GGACATGTAC CTGATCAAGC ACTGA
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Protein sequence | MRRALPFRYH YQSHTMKHTH AFAAVLAALA LTIAPSAPAV TVASNVTLAD QQDLTRQVPA EVESLDPAHI ESWTGNTIGL DLFEGLARID ASGAVVPGVA QAWEHKAPDT WIFKLRRDAK WSNGQPVTAA DFVYAWQRLA DPKTGSKYTI LVEFVKNASA IIAGKQPPGD LGIRAIDPYT IEVKTEVPVS YFPELTAMAP LTPVNKDAVA KFGDAWTRPK NIVSNGPYTL VDWQPNNRIV MAKSDKYWNA RNVVIRKVTY LPIENDETAL RMYQAGQIDY TYSIPAGGFG QISKQFGKEL RPGLQLATYY YYLKNSDPAL KDKRVREALA MVLDREILTS KITQAGEVPM YGLMPKGVKG VQRPFTPDWA SWPMARRVDY AKNLLKQAGH GDANPLTFTL TYNTNDLHKK VALFAASEWR TKLGVTAKLE NVEFKVLMKQ RHDGKVQVAR DGWFADYNDA MTFFDLIRCG SSQNTVGYCN PKVDSLVAEA NQKLDDGARA ALLTQAHDLA MNDYPMVPLF QYSADRLVKS YVGGYTLTNY IDMRASQDMY LIKH
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