| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BMA10229_1294 |
|---|
| Symbol | |
|---|
| ID | 4789729 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Burkholderia mallei NCTC 10229 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008835 |
|---|
| Strand | + |
|---|
| Start bp | 1343989 |
|---|
| End bp | 1344957 |
|---|
| Gene Length | 969 bp |
|---|
| Protein Length | 322 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 66% |
|---|
| IMG OID | |
|---|
| Product | sigma-54 dependent transcriptional regulator |
|---|
| Protein accession | YP_001025096 |
|---|
| Protein GI | 124382251 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 28 |
|---|
| Plasmid unclonability p-value | 0.891307 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCGCAAC ACAGCAGTGA CGGCAGACGG CTGCACGGCA ATTCGTGTCT GATCCAGGCG
CTGTTGCACA AGATCGAAAA AGTGGCCGCG ACTCGTGCAA GCGTGTTGAT CGTCGGCGAA
AGCGGGGTCG GCAAAGATAT CGTCGCAAGA CTCCTCCATG ACATGAGCCC ACGCCGCCGT
GGCCCGTTCG TTCCGGTCAA TTGCGGCGCG ATTCCGGCCG ACATCGCCGA ATCGCAGTTG
TTCGGCCACG AGAAGGGCAG CTTCACCGGC GCGGCCGCGC AGCACATCGG CTTCTTCGAG
GCCGCGCGCG GCGGCACGAT CTTCCTCGAC GAAGTGGCCG AGATGTCGCG CGATCTGCAG
GTGAAGCTGC TGCGCGCGCT CGAATCGAAC ACCATCACGC GCGTGGGCGG CAGCGAGCCG
ATCGCGCTCG ACGTGCGCGT GGTCGCGGCC ACTCACCACA ACCCTGCCGA GGCGGTGCAG
GAAGGGCGCT TTCGCGAAGA CCTGTTCTAC CGGCTCGCCG TGTTCGCGCT GCGCGTGCCG
GCGCTCAGGC ATCGCGAGGA CGATATCGAG GGCATCGCGC AGGAGCTCGT CGATACGCTC
AACAGCCGGC ACAGCACGCG CAAGCGGCTC TCGGGGCAGG CGCTGAAGAC GCTGCGCACC
TATTCGTGGC CGGGCAACGT GCGCGAGCTG CGCAATGCGA TCGAGCGCGC GTACATCCTC
TCCGACGAGC AAATCGAGCA GTTGCCGGTG CGACGGCTCG CGCCGCGCGA CGACGTGCGC
CGGAACGCGA TGACGCTGCC GCTCGGCATG ACGCTCGCGC ATTCGCAGCA GCGCTTCATC
GCCGCGTCGC TCAAGTACTT CGACGGCGAC AAGCCGCGCA CCGCGAAGGC GCTCGGCATC
AGCCTGAAGA CGCTGTACAA CCGGCTCGCG CTGATGCGCG AGCACGACGG GGAAACCGCG
CAGCACTAA
|
|---|
| Protein sequence | MSQHSSDGRR LHGNSCLIQA LLHKIEKVAA TRASVLIVGE SGVGKDIVAR LLHDMSPRRR
GPFVPVNCGA IPADIAESQL FGHEKGSFTG AAAQHIGFFE AARGGTIFLD EVAEMSRDLQ
VKLLRALESN TITRVGGSEP IALDVRVVAA THHNPAEAVQ EGRFREDLFY RLAVFALRVP
ALRHREDDIE GIAQELVDTL NSRHSTRKRL SGQALKTLRT YSWPGNVREL RNAIERAYIL
SDEQIEQLPV RRLAPRDDVR RNAMTLPLGM TLAHSQQRFI AASLKYFDGD KPRTAKALGI
SLKTLYNRLA LMREHDGETA QH
|
|---|
| |