Gene BMA0402 details

Gene Information

• Locus tag: BMA0402
• Symbol: rimM
• ID: 3088548
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Burkholderia mallei ATCC 23344
• Kingdom: Bacteria
• Replicon accession: NC_006348
• Strand: -
• Start bp: 425699
• End bp: 426334
• Gene Length: 636 bp
• Protein Length: 211 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 637561249
• Product: 16S rRNA-processing protein RimM
• Protein accession: YP_102217
• Protein GI: 53724763
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0806] RimM protein, required for 16S rRNA processing
• TIGRFAM ID: [TIGR02273] 16S rRNA processing protein RimM

Plasmid Coverage information

• Num covering plasmid clones: 30
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGTTCGTCC GCAAGCCGGT CGAGCGCGCG CCCGCGAAAG GGGCGAGCGA CGGCGCGGTT 
GATTCGCAAG CAATTCGCAT CGATGCGGCG CAGTCGTGGC CGGACGATGC GGTCGAGGTC 
GGCGCGGTGG TCGATGCGTA CGGCCTGAAG GGCTGGGTCA AGCTCGCGGC CCACGCCGGT 
GCGGGGCGAG GCGGCGATGC GCTGCTCAAG GCCCGCGACT GGTGGCTGCA AAAGGGCGCG 
GAGCGAAAGT TCGCGCGCGT CACGCAGGCG AAGCTGCACG GCGACACGGT CGTCGCACAT 
CCGGACGGCT CGGTCGATCG CGATACGGCG CTCGCGCTGC GCGGCGCTCG CGTGTTCGTG 
CGCCGCGGCG ATTTCCCGGC GCTCGCCGCC GACGAATTCT ACTGGGTCGA TCTGATCGGC 
CTCGATGTCG TCAACGAGGC GGGTGTCGCG CTCGGCAAGA TCGCCGACAT GATCGACAAC 
GGCGTGCATT CGATCATGCG CGTCGAATAT CCGGCGACGG GCAAGGATGG TCGGCCGAAA 
ACCGGCGAGC GGCTGATTCC GTTCGTCGGC GTGTACGTGA AGGCGGTCGA GCAGGCGGCG 
GGGCGCGTCG TCGTCGACTG GGAAGCCGAT TACTGA 

 

Protein sequence

MFVRKPVERA PAKGASDGAV DSQAIRIDAA QSWPDDAVEV GAVVDAYGLK GWVKLAAHAG 
AGRGGDALLK ARDWWLQKGA ERKFARVTQA KLHGDTVVAH PDGSVDRDTA LALRGARVFV 
RRGDFPALAA DEFYWVDLIG LDVVNEAGVA LGKIADMIDN GVHSIMRVEY PATGKDGRPK 
TGERLIPFVG VYVKAVEQAA GRVVVDWEAD Y