Gene BMA0359 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA0359 
SymbolpdxH 
ID3089445 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp382073 
End bp382717 
Gene Length645 bp 
Protein Length214 aa 
Translation table11 
GC content69% 
IMG OID637561209 
Productpyridoxamine 5'-phosphate oxidase 
Protein accessionYP_102177 
Protein GI53726299 
COG category[H] Coenzyme transport and metabolism 
COG ID[COG0259] Pyridoxamine-phosphate oxidase 
TIGRFAM ID[TIGR00558] pyridoxamine-phosphate oxidase 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0016328 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGACAC TTGCCGATCT CCGCACCAAC TACTCCCGCG CGTCGCTCGA CGCGGCGGAC 
GTGAACCCGA ATCCGTTCGT CCAGTTCGAC GTCTGGTTCA AGGAAGCGCT CGACGCGCAA
CTGCCCGAGC CCAACACGAT GACGCTCGCG ACCGTCGACG AATCCGGCCG GCCGTCCGCG
CGGATCGTCC TCATCAAGGG CGCCGACGAG CGCGGCTTCG TGTTCTTCAC GAACTACGAA
AGCCGCAAGG GGCGCGAGCT CGCGCACAAC CCGAACGCGG CGCTGCTCTT CTACTGGATC
GAACTCGAGC GCCAGGTGCG CGTCGAGGGG CGCATCGAGA AGACGAGCGA AGAGGAAAGC
GACCGGTATT TCGCGTCGCG GCCGCTCGGC TCGCGGATCG GCGCATGGGC GTCCGAGCAG
AGCGCGGTGA TCGAGAGCCG CGCGCTGCTC GAGGCGCGCG AGAAGGAAAT CGGCGCGCGC
TTCGGCGAGA ACCCGCCGCG CCCGCCGCAC TGGGGCGGCT ACCGTCTCGT GCCGAGCTCG
ATCGAATTCT GGCAGGGCCG CCCGTCGCGG CTCCACGACC GCCTGCTGTA TACGCGCGAC
GCCGCGTCGG CGAGCGGCTG GAAGATCACG CGCCTCGCGC CGTAA
 
Protein sequence
MTTLADLRTN YSRASLDAAD VNPNPFVQFD VWFKEALDAQ LPEPNTMTLA TVDESGRPSA 
RIVLIKGADE RGFVFFTNYE SRKGRELAHN PNAALLFYWI ELERQVRVEG RIEKTSEEES
DRYFASRPLG SRIGAWASEQ SAVIESRALL EAREKEIGAR FGENPPRPPH WGGYRLVPSS
IEFWQGRPSR LHDRLLYTRD AASASGWKIT RLAP