Gene BMA0176 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBMA0176 
Symbol 
ID3090190 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBurkholderia mallei ATCC 23344 
KingdomBacteria 
Replicon accessionNC_006348 
Strand
Start bp186042 
End bp187307 
Gene Length1266 bp 
Protein Length421 aa 
Translation table11 
GC content69% 
IMG OID637561046 
ProductD-serine deaminase, putative 
Protein accessionYP_102015 
Protein GI53724982 
COG category[E] Amino acid transport and metabolism 
COG ID[COG3616] Predicted amino acid aldolase or racemase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones17 
Plasmid unclonability p-value0.783943 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAAAGTTA CAAACTATCA GGAAGCGACG ATCGACCCGT TCGGCAAGGG GCTCGGCAAC 
GTGCCGAGCG CGAGCGTGCC GCTGTCGGAC GCGGGCCGCC TCGAGTGGAA CCTGCTCGCC
GAGGACGTGA GCCTGCCCGC CGCCGTGCTG TATGCGGACC GCATCGAGCA CAACCTGAAG
TGGATGCAGG CGTTCGTCGC CGAATACGGC GTGAAGCTCG CACCGCACGG CAAGACGACG
ATGGCGCCGC AGCTGTTTCG CCGCCAGCTC GACACGGGCG CGTGGGGCAT CACGCTCGCG
ACCGCGCATC AAACGCGCGC CGCGTACCAC GGCGGCGTGC GGCGCGTGCT GCTGGCGAAC
CAGCTCGTCG GCCGGCACAA CATGGCGATG ATCGCCGAAC TGCTGACCGA CCCCGATTTC
GAGTTTTTCT GCCTCGTCGA TTCGGTCGAC GGCGTCGAGC AGCTCGCGCG CTTCTTCGGC
GCGGCGGGCA AGCCGCTCAA CGTGCTGCTC GAGCTCGGCG TGCCGGGCGG GCGCACCGGC
GTGCGCGACG CGGTGCTCAC CGCGATCGCG CGCCACGCGG GCGTGCTCGA GCTCGCCGGC
ATCGAGCTGT ACGAAGGCGT GCTGAAGGAG GAAGGCGAGA TCCGCGCGTT CCTGCGGCGC
GCGGTCAAGC TCGTTCACGA GCTCGCGTCG GCCAGCCGCT TCGCGCGCGC GCCGGCGCTG
CTGTCGGGCG CGGGCTCCGC GTGGTACGAC GTCGTCGCCG ACGAATTCGC GCAGGCGGCC
GCGGCCGGCG TGATCGACGT CGTGCTGCGC CCCGGCTGCT ATCTGACGCA CGACGTCGGC
ATCTACCGCA AGGCGCAGAC CGACATCTTC GCGCGCAACC CGATCGCGCG GAAAATGGGC
GAAGGGCTGT TGCCGGCGCT GCAGCTGTGG GCGTACGTGC AATCGATTCC CGAGCCCGAG
CGCGCGATCG TCGCGCTCGG CAAGCGCGAC GCCGCGTTCG ATGCGGGCCT GCCGGAACCG
GCGCGCCACT TCCGTCCGGG CGCAGGCGGC CTGCCGCGCG AGATCGCGCC GGGCGAAGGC
TGGGAAGTGA CGGGGATGAT GGATCAGCAC GCATACCTGA AGATCCCGGC GGGCGCGGAC
CTGAAGGTCG GCGACATGGT GTCGTTCGAC ATCTCGCATC CGTGCCTCAC GTTCGACAAG
TGGCGGCAGT TGCTCGTCGT CGATCCGCAG TATCGCGTGA CGGAGGTGAT CGAGACGTAC
TTCTGA
 
Protein sequence
MKVTNYQEAT IDPFGKGLGN VPSASVPLSD AGRLEWNLLA EDVSLPAAVL YADRIEHNLK 
WMQAFVAEYG VKLAPHGKTT MAPQLFRRQL DTGAWGITLA TAHQTRAAYH GGVRRVLLAN
QLVGRHNMAM IAELLTDPDF EFFCLVDSVD GVEQLARFFG AAGKPLNVLL ELGVPGGRTG
VRDAVLTAIA RHAGVLELAG IELYEGVLKE EGEIRAFLRR AVKLVHELAS ASRFARAPAL
LSGAGSAWYD VVADEFAQAA AAGVIDVVLR PGCYLTHDVG IYRKAQTDIF ARNPIARKMG
EGLLPALQLW AYVQSIPEPE RAIVALGKRD AAFDAGLPEP ARHFRPGAGG LPREIAPGEG
WEVTGMMDQH AYLKIPAGAD LKVGDMVSFD ISHPCLTFDK WRQLLVVDPQ YRVTEVIETY
F