| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1904 |
|---|
| Symbol | |
|---|
| ID | 6362836 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 2262462 |
|---|
| End bp | 2262794 |
|---|
| Gene Length | 333 bp |
|---|
| Protein Length | 110 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 46% |
|---|
| IMG OID | 642681112 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001955847 |
|---|
| Protein GI | 189440766 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG3512] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | [TIGR01573] CRISPR-associated endoribonuclease Cas2 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 15 |
|---|
| Plasmid unclonability p-value | 0.246432 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAACGCG ATGAGGACAG TGGCGGCATG TGGTGCTTGG TGATGTTTGA TTTGCCGGTC
AAGACAAAAC GGCAACGGCA TGCTGCAACT GTCTTTAGAA ATATGTTGCT CGACATGGGA
TATGGAATGG TGCAGTATTC CGTATATGTG CGGTATACGC CTACGCAATC GGGTAATAGG
GCGACGGTCA AAATGATTAA AGACAATCTG CCAGCTAATG GCTTAGTTAG AATTTTGCAT
ATTAGCGATC ATCAGTGGTC CACGGCGGCC CGATTTTCTT CTGGAAAACG TGAGATTGAG
GAAGAAACGC CTGACTTTCT CACGCTTTTT TGA
|
|---|
| Protein sequence | MKRDEDSGGM WCLVMFDLPV KTKRQRHAAT VFRNMLLDMG YGMVQYSVYV RYTPTQSGNR
ATVKMIKDNL PANGLVRILH ISDHQWSTAA RFSSGKREIE EETPDFLTLF
|
|---|
| |