| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1895 |
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| Symbol | livF |
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| ID | 6362827 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2250373 |
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| End bp | 2251077 |
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| Gene Length | 705 bp |
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| Protein Length | 234 aa |
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| Translation table | 11 |
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| GC content | 61% |
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| IMG OID | 642681103 |
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| Product | branched-chain amino acid ABC transporter ATPase |
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| Protein accession | YP_001955838 |
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| Protein GI | 189440757 |
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| COG category | [E] Amino acid transport and metabolism |
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| COG ID | [COG0410] ABC-type branched-chain amino acid transport systems, ATPase component |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.250393 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGCTGGAAA TCAAGGATCT ATGCGTTTCC TATGGCGCGA TCGACGCGGT CAAGGGCATT
AGCCTCAAGG TGAACGACGG CGAGATCGTC TCCCTGATCG GAGCCAACGG CGCCGGCAAG
ACCACCACCC TGCACACCAT CACCGGTCTG GTGCCTGCCA AATCCGGCAG CATTACCTAT
GATGGCCACG ATCTGCTCAA AACGCATGCG AACAAGATCG TCACGCTGGG CATGGCCCAT
GTGCCGGAAG GCCGCCACGT GTTCACCCGC ATGAGCGTGC AGGAGAACCT AGAGATGGGC
GCGTTCAGTC TCAAAGACCA GTCCAGTCTG GGTAAGGATC TTGAGATGGT GTTCGACTAC
TTCCCGCGTT TGAAGGAACG TCGCCGCCAG CTGGCCGGCA CGCTTTCCGG CGGTGAGCAG
CAGATGGTGG CCATGGGCCG CGCCCTGATG AGCCATCCGA AGACCATCCT CATGGATGAG
CCGTCGATGG GTCTGTCCCC GCTGCTGGTC AAGGAGATCT TCGACATCAT CGTCACGCTG
CGCAAGCGTG GCATCACCGT GCTGCTCGTG GAGCAGAACG CGAAGATGGC CCTGTCCATC
GCGGATCGCG CCTACGTGCT CGAGACCGGC AAGATCACCA TGGAGGGCAA GGCCTCCGAC
CTGCTGCACG ACGAGAAGGT GCGCAAGGCG TACCTCGGCG CGTGA
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| Protein sequence | MLEIKDLCVS YGAIDAVKGI SLKVNDGEIV SLIGANGAGK TTTLHTITGL VPAKSGSITY
DGHDLLKTHA NKIVTLGMAH VPEGRHVFTR MSVQENLEMG AFSLKDQSSL GKDLEMVFDY
FPRLKERRRQ LAGTLSGGEQ QMVAMGRALM SHPKTILMDE PSMGLSPLLV KEIFDIIVTL
RKRGITVLLV EQNAKMALSI ADRAYVLETG KITMEGKASD LLHDEKVRKA YLGA
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