| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1875 |
|---|
| Symbol | |
|---|
| ID | 6362742 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 2230264 |
|---|
| End bp | 2231316 |
|---|
| Gene Length | 1053 bp |
|---|
| Protein Length | 350 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 56% |
|---|
| IMG OID | 642681082 |
|---|
| Product | MalF-type ABC sugar transport systems permease component |
|---|
| Protein accession | YP_001955818 |
|---|
| Protein GI | 189440737 |
|---|
| COG category | [G] Carbohydrate transport and metabolism |
|---|
| COG ID | [COG1175] ABC-type sugar transport systems, permease components |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 7 |
|---|
| Plasmid unclonability p-value | 0.0432685 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGTCAGTTT CAGCAGGCGC GAAGGTACAG CGCCGCACGT CGGGCTTAAG CGACAAGGTT
CGCAAACGTA TCGAAATCAC CATCCTTTCG CTTCCTGCCC TGATCATGTT CCTCGGATTC
GTCATCCTGC CGGTGTTCAT GGCCGGCTAC TACGGATTCT TCAAGTGGAA GGGCTATGGC
AAGCCCACCG TCAACGGCCA GTTCATCGGT TTTGAAAACT ACAAGGTCAT TCTGACCGAC
CCGAACTTCC AGCAGGCATT GGGACACACG CTATTCGTGG TCGTCGCTTC GCTCGTCATC
CAGGGGCCGC TGGCCATCCT CTTCGCCCTG CTGCTCAACC AGAAATTCAA GGGCCGCGCA
CTGATTCGTA CCCTGATTTT CGTGCCGTAC GTCGTTTCCG AAGTCATCGT TGGCACCGGC
TGGAGTCTCA TCCTCCAGAC CACAGGCGCA TTGAACGCGC TACTCAAGAA AATAGGACTT
GGCGGGGCGG ACTGGATCTC CGATCCGAAA ATCGCCATCT GGACATTGAT GTTCATCATT
TCGTGGAAGT ACATCGGCTT CGCCGTCATC CTGATGATTG CCGGCATGCA GTCGATTCCC
GAAGACCTCT ATGAAGCCGC GAAGGTGGAT GGTGCTGGAT TCTGGCGTCA GCAGTGGAGC
ATCACCCTGC CACTGCTCGG CCCCACCATT CGTATCTGGG CATTCATGTC GATTATCGGT
TCTCTTCAGC TGTTCGACTT GGTCTACATC ATCTGGGGCC AGTACGTGTC GTCTACCGCA
GGAACGTCCA CCATGGCAAC CTACATGGTG CGCGAAGGTC GACTCGCCAA CAACTATGGT
TACGGTTCCG CCGTGGCCGT GGTGATCTTC ATCATCTCGC TGGTCATTGC CTTGACCTAC
CAGCGGTTCG TACTTAACCG AGATCTCGAA GGTGCGCTCA CCGACGAGAA GGATGCCAAG
CGTCGTGCCA AGCGTGCGGC GAAGGAAGCG GCCAAGCTTG CCAAGGCCAA TGGCAATGCC
GCAGCAGTTG CAAATGAGGT GGTTTCACAA TGA
|
|---|
| Protein sequence | MSVSAGAKVQ RRTSGLSDKV RKRIEITILS LPALIMFLGF VILPVFMAGY YGFFKWKGYG
KPTVNGQFIG FENYKVILTD PNFQQALGHT LFVVVASLVI QGPLAILFAL LLNQKFKGRA
LIRTLIFVPY VVSEVIVGTG WSLILQTTGA LNALLKKIGL GGADWISDPK IAIWTLMFII
SWKYIGFAVI LMIAGMQSIP EDLYEAAKVD GAGFWRQQWS ITLPLLGPTI RIWAFMSIIG
SLQLFDLVYI IWGQYVSSTA GTSTMATYMV REGRLANNYG YGSAVAVVIF IISLVIALTY
QRFVLNRDLE GALTDEKDAK RRAKRAAKEA AKLAKANGNA AAVANEVVSQ
|
|---|
| |