Gene BLD_1742 details

Gene Information

• Locus tag: BLD_1742
• Symbol: nusA
• ID: 6363628
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 2078387
• End bp: 2079454
• Gene Length: 1068 bp
• Protein Length: 355 aa
• Translation table: 11
• GC content: 65%
• IMG OID: 642680943
• Product: transcription elongation factor NusA
• Protein accession: YP_001955685
• Protein GI: 189440604
• COG category: [K] Transcription
• COG ID: [COG0195] Transcription elongation factor
• TIGRFAM ID: [TIGR01953] transcription termination factor NusA

Plasmid Coverage information

• Num covering plasmid clones: 19
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGAACTGG ACCTGACAGG AATACACAAG CTCGCCGCCG AGCAAGGAAT CGACCCCGAA 
ACCCTGGATG ATGCGCTGGC AGAGGCCCTG CGCCTCGCCT ACCTCAAGAC CCCGCACGCC 
GCCAAGCACG CGCGCGTGGA GCTTGACGAA CGTTCCGGCA ACTTCACCGT GTGGGCCGCC 
GACGAAATTC CGGTCGAACC CACCGAAGAC AACCCTTACC CCGTTCCCAA GCTGGGCGAG 
GAATACGATG ACACCCCGCG TGACTTCGGC CGTCTCGCCG CAGCCACCGC ACGCCAGGTC 
ATCACCCAGC TGTTCCGCCG CGCCGAAGAT GAGAAGGTAT TCGGTTCGTT CTCCGGCCAG 
AAGGGCAAGC TCATCACCGG CATCATCCAG CAGGATGCTT CCGACCCCTC CAACGTGCAT 
GTCGCGATGG GCGATGTCGA AGCCATTCTG CCTCGCCGTG AGCAGGTGCC CGGCGAACGT 
TACCGCCACG GCGAACGCAT CCGCGTGTAC GTGGTGAACG TGGCCCGTGG CATCAAGGGC 
CCGGAAATCG TGGTGTCCCG CTCCCACCCG GAGCTGGTCC GCAAGCTGTT CGAGCGCGAA 
GTGCCGGAAC TGGTCTCCGG TGCCGTGTCC ATCATGGCCA TCGCTCGTGA GGCCGGCGCC 
CGCACCAAGA TCGCGGTCAA GGCCAACACC GATGGCGTGA ACCCGAAGGG CGCGCTGATC 
GGCCCCGGCG GCGCTCGCGT GCGTGCCGTT ATGGAGAACC TTGGCCCGGA GAAGATCGAC 
ATCGTCGACT ACTCCGACGA TCCGGCCAAG TTCGTGGCAG CCGCGCTGTC CCCGGCTGTG 
GCCACCGGCG TGCAGGTGAT CAGCGAGAAG AACAAGACCG CCATCGCCTT CATCCACGAC 
GACCAGCTGT CCCTGGCCAT CGGCAAGGAA GGCCAGAACG CACGACTGGC AGCCAAGCTG 
ACCGGCTGGA AGATCGGCAT CGAATCCGCC GAGGCCCATG CCAAGAAAGT CGCCGCCGAA 
AAGGCCGCCC AGGCTGCGGC CGAGGCTGCT GCTCCGGAAG CCGAATAG 

 

Protein sequence

MELDLTGIHK LAAEQGIDPE TLDDALAEAL RLAYLKTPHA AKHARVELDE RSGNFTVWAA 
DEIPVEPTED NPYPVPKLGE EYDDTPRDFG RLAAATARQV ITQLFRRAED EKVFGSFSGQ 
KGKLITGIIQ QDASDPSNVH VAMGDVEAIL PRREQVPGER YRHGERIRVY VVNVARGIKG 
PEIVVSRSHP ELVRKLFERE VPELVSGAVS IMAIAREAGA RTKIAVKANT DGVNPKGALI 
GPGGARVRAV MENLGPEKID IVDYSDDPAK FVAAALSPAV ATGVQVISEK NKTAIAFIHD 
DQLSLAIGKE GQNARLAAKL TGWKIGIESA EAHAKKVAAE KAAQAAAEAA APEAE