Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1733 |
Symbol | rpoA |
ID | 6363817 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2067354 |
End bp | 2068349 |
Gene Length | 996 bp |
Protein Length | 331 aa |
Translation table | 11 |
GC content | 61% |
IMG OID | 642680933 |
Product | DNA-directed RNA polymerase subunit alpha |
Protein accession | YP_001955676 |
Protein GI | 189440595 |
COG category | [K] Transcription |
COG ID | [COG0202] DNA-directed RNA polymerase, alpha subunit/40 kD subunit |
TIGRFAM ID | [TIGR02027] DNA-directed RNA polymerase, alpha subunit, bacterial and chloroplast-type |
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Plasmid Coverage information |
Num covering plasmid clones | 17 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | GTGCTTATTG CACAGCGTCC GACTCTTACC GAGGAATCTC TGAATCCGCA GCGCTCCCGC TTCACCATCG AGCCGCTCGA GCCTGGCTTC GGCTACACGC TCGGCAACTC GCTGCGTCGC ACGCTGCTGA GCTCCATCCC GGGTGCTGCC GTGACCTCCG TGCGTATTTC CGGTGCCCTG CATGAGTTCA CCACTCTGCC AGGTGTCCAG GAAGACGTCA CCGAGATCCT GCTGAACATC AAGGGCATCG TGCTCACCAG CGAATACGAC GAGCCTGTGG TCATGTATCT GCGCAAGAGC GGCAAGGGCG AAGCCGTGGC TGGGGACATC ACCCCGCCGG CCGGCGTCAC CATTGCCAAC CCGGAGCAGC ACATCGCTAC CCTCGCCGAC GATGGCGAAC TCGAGATCGA GTTCACTGTC GAGCGTGGCC GTGGCTATGT TCCTGCCCAG ATGAACAAGC AGGACAACGA TGAGATCGGC CGTATTCCGG TTGATTCCAT CTACTCCCCG GTACTCAAGG TGAGCTACAA GGTCGAGGCC ACCCGTGTGG AACAGCGCAC GGACTTCGAC AAGCTCATCC TGGACGTGGA GACCAAGCCC GCCATCTCCC CGCGTGACGC GGTGGCTTCC GCCGGTTCCA CCTTGGTGGA GCTCTTCGGC CTGTGCCGTG AGCTCAACGC CCAGGCTGAA GGCGTCGAGG TCGGTCCGGC CCCGGTGGCC GAGGAGACCA ACCCCGAGAT GGCCGTTCCG ATTGAGGACC TCAACCTGAC GCAGCGTTCT TACAACTGCC TCAAGCGCGA GGGCATCCAC ACCATCGGTG AGCTTGTCTC CCACACCGAG CAGGACCTGC TCGACATCCG CAATTTCGGT ATGAAGTCAA TCGATGAGGT CAAGGAGAAG CTGCAGACCT TGGGCCTGAG CCTCAAGTCC TCGCCGATGG CCTTCGATAC CAATAATCTC GAAGGTGGCA CGTTCTTCTC GCCGGAAGAC GAGTGA
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Protein sequence | MLIAQRPTLT EESLNPQRSR FTIEPLEPGF GYTLGNSLRR TLLSSIPGAA VTSVRISGAL HEFTTLPGVQ EDVTEILLNI KGIVLTSEYD EPVVMYLRKS GKGEAVAGDI TPPAGVTIAN PEQHIATLAD DGELEIEFTV ERGRGYVPAQ MNKQDNDEIG RIPVDSIYSP VLKVSYKVEA TRVEQRTDFD KLILDVETKP AISPRDAVAS AGSTLVELFG LCRELNAQAE GVEVGPAPVA EETNPEMAVP IEDLNLTQRS YNCLKREGIH TIGELVSHTE QDLLDIRNFG MKSIDEVKEK LQTLGLSLKS SPMAFDTNNL EGGTFFSPED E
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