| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1731 |
|---|
| Symbol | rpsM |
|---|
| ID | 6363815 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 2066410 |
|---|
| End bp | 2066787 |
|---|
| Gene Length | 378 bp |
|---|
| Protein Length | 125 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642680931 |
|---|
| Product | 30S ribosomal protein S13 |
|---|
| Protein accession | YP_001955674 |
|---|
| Protein GI | 189440593 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0099] Ribosomal protein S13 |
|---|
| TIGRFAM ID | [TIGR03631] 30S ribosomal protein S13 |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 20 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGGCACGTC TTGCCGGAGT CGACATCCCC AATGAGAAGC GCATCGAGAT CGCCCTCACC
TACATTTTCG GTGTGGGTCG CACTCGTGCC AAGGAAACGC TTGCCGCGAC CGGTATTAGT
CCGGACATCC GCGTCAAGGA TCTCACCGAC GAGCAGCTGA TTACGCTGCG TGACTACCTC
GAAGCCAACT ACAAGATCGA GGGTGACCTG CGTCGTGAAG TCGATGCAGA TATTCGTCGC
AAGATTCAGA TCAACTGCTA CCAAGGCCAG CGTCACCGTA AGGGACTTCC TGTGCGCGGC
CAGCGCACCA AGACCAATGC TCGTACCCGC AAGGGCCCGA AGCGCACGGT CGCCGGAAAG
AAGAAGGCCA CCAAGTAG
|
|---|
| Protein sequence | MARLAGVDIP NEKRIEIALT YIFGVGRTRA KETLAATGIS PDIRVKDLTD EQLITLRDYL
EANYKIEGDL RREVDADIRR KIQINCYQGQ RHRKGLPVRG QRTKTNARTR KGPKRTVAGK
KKATK
|
|---|
| |