| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1727 |
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| Symbol | secY |
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| ID | 6363811 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 2063662 |
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| End bp | 2064999 |
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| Gene Length | 1338 bp |
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| Protein Length | 445 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642680927 |
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| Product | preprotein translocase subunit SecY |
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| Protein accession | YP_001955670 |
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| Protein GI | 189440589 |
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| COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
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| COG ID | [COG0201] Preprotein translocase subunit SecY |
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| TIGRFAM ID | [TIGR00967] preprotein translocase, SecY subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 1 |
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| Plasmid unclonability p-value | 0.0000416171 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGAGGACAC TAATCCAGGC CCTGAAAACC AAAGAGTTGA GGAAGAAGAT TCTCTTCGTC
CTGTTCATCA TCATCGTCTA CCGCATCGGT TCGTTCATTC CGACCCCTGG CGTGGACTAC
AACGTGGTGA ACAAGTGCAT GGCCACCATC GGCAGCGCCT CCCAGGAGAA CTTCATCGGA
CTGGTGAACC TCTTCTCCGG CGGCGCCATG CTCCAGCTGT CCATCTTCGC GCTGGGCGTC
ATGCCGTACA TCACCGCGTC CATCGTGGTG CAGCTGCTGC GCGTGGTCAT CCCCCGCTTC
GAGGCCCTGC ACAAGGAGGG CCAGTCCGGC GAGGCCAAGC TCACCCAGTA CACCCGTTAC
CTGACCATCG GCCTGGCCGT GCTCCAGTCC ACCACCATCC TGGTCACCGC CCGCTCCGGC
GCCCTGTTCA ATTACCAGTG CGACCAGGTC ATCCCGGACG GTTCCGTGTT CAACCTCGTG
GTCATGGTCC TCATCATGAC CGGCGGCACC GGCCTGATCA TGTGGATGGC CGAGCTCGTG
ACCGACAAGG GCATCGGCCA GGGCATGTCC ATCCTGATCT TCATGTCCAT CTGCTCCGGC
TTCCTGCCCC AATTGTGGGA GATCGGCTAC GGCACCGACG GCACCGATGG CGACTGGCTG
AAGTTCGGCA TCGTCGTGGG CGTGCTCGTG GTCATCCTCA TCTTCGTCGA CTTCGTCGAA
CTGTGCCAGC GCCGCGTGCC GGTCCAGTAC ACGCGCCGCA TGATCGGCCG TAAGATGTAC
GGCGGCTCCT CCACCTACTT GCCGCTGAAG ATCAACATGT CCGGCGTCAT CCCGCCGATC
TTCGCCTCCT CGATCCTCGC CATCCCGACC CTGATCGCCC AGTTCGGCAA GTCCGACCAG
TCGTGGGTCA AGTGGATCAA CGCCAACCTG GCGAACACCA CATCCGTGTG GTACATCGCC
CTGTACGCGC TGATGATCGT GTTCTTCTGC TTCTTCTACA CCTCGATCAC GTTCAACCCG
GACGAGACCG CGGACAACAT GAAGCAGTAC GGCGGCTTCA TCCCCGGCAT CCGCGCCGGC
AACGCCACCA GCCGCTACCT GACCTACGTG ATGAATCGAC TCAACACCGT CGGCGCCGTC
TACCTGCTGT TCGTGGCCCT GATCCCGACC GTGCTGATCA TGGCCCTCGG CCTCAACGCC
AAGCTGCCGT TCGGTGGCAC CACGATCCTG ATTATCGCGG GCGTGGGCCT CGACACCCTG
CGCCAGGCCA AGGCCCAGAC CGAACAGTTC CAGTACACCG GCTTCCTGTT CGAAAACGTG
GACCACAAAG AGGGCTGA
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| Protein sequence | MRTLIQALKT KELRKKILFV LFIIIVYRIG SFIPTPGVDY NVVNKCMATI GSASQENFIG
LVNLFSGGAM LQLSIFALGV MPYITASIVV QLLRVVIPRF EALHKEGQSG EAKLTQYTRY
LTIGLAVLQS TTILVTARSG ALFNYQCDQV IPDGSVFNLV VMVLIMTGGT GLIMWMAELV
TDKGIGQGMS ILIFMSICSG FLPQLWEIGY GTDGTDGDWL KFGIVVGVLV VILIFVDFVE
LCQRRVPVQY TRRMIGRKMY GGSSTYLPLK INMSGVIPPI FASSILAIPT LIAQFGKSDQ
SWVKWINANL ANTTSVWYIA LYALMIVFFC FFYTSITFNP DETADNMKQY GGFIPGIRAG
NATSRYLTYV MNRLNTVGAV YLLFVALIPT VLIMALGLNA KLPFGGTTIL IIAGVGLDTL
RQAKAQTEQF QYTGFLFENV DHKEG
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