Gene BLD_1726 details

Gene Information

• Locus tag: BLD_1726
• Symbol: rplO
• ID: 6363810
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 2062937
• End bp: 2063389
• Gene Length: 453 bp
• Protein Length: 150 aa
• Translation table: 11
• GC content: 64%
• IMG OID: 642680926
• Product: 50S ribosomal protein L15
• Protein accession: YP_001955669
• Protein GI: 189440588
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0200] Ribosomal protein L15
• TIGRFAM ID: [TIGR01071] ribosomal protein L15, bacterial/organelle

Plasmid Coverage information

• Num covering plasmid clones: 2
• Plasmid unclonability p-value: 0.00000205453
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAGATA ACGAAATCCT GCAGATGCAC GACCTGAAGC CCGCCCCGGG TGCCAAGAAG 
GACCGCACCC GTGTGGGCCG CGGTGAAGGC TCCAAGGGTA AGACCGCCGG TCGTGGCGCC 
AAGGGCCAGA CGAAGCGCAA CCACGTGCGT CCGGGCTTTG AAGGCGGCCA GCTGCCGCTG 
TACATGCGCC TGCCGAAGCT TCGTGGCTTC AAGAACCCGT TCAAGGTCGA GTTCCAGGTC 
ATCAACATCG CTCGTCTCGT GGAGCTCTTC CCCGAGGGCG GCGAGGTTGC TGTGGCCGAC 
CTGATCGCCA AGGGCGCTGT TCGTGACAAC GCTCCGGTGA AGGTTCTGGG CGACGGCGAG 
ACCACCGTGG CTTTCACCCT CAAGGGTGTT AAGGCTTCGG CTTCCGCCAA GTCCAAGATC 
GAGGCCGCCG GCGGTTCCGT TTCCGAGGAC TGA 

 

Protein sequence

MADNEILQMH DLKPAPGAKK DRTRVGRGEG SKGKTAGRGA KGQTKRNHVR PGFEGGQLPL 
YMRLPKLRGF KNPFKVEFQV INIARLVELF PEGGEVAVAD LIAKGAVRDN APVKVLGDGE 
TTVAFTLKGV KASASAKSKI EAAGGSVSED