Gene BLD_1708 details

Gene Information

• Locus tag: BLD_1708
• Symbol: rplD
• ID: 6364326
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 2054800
• End bp: 2055456
• Gene Length: 657 bp
• Protein Length: 218 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642680908
• Product: 50S ribosomal protein L4
• Protein accession: YP_001955651
• Protein GI: 189440570
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0088] Ribosomal protein L4

Plasmid Coverage information

• Num covering plasmid clones: 6
• Plasmid unclonability p-value: 0.00274066
• Plasmid hitchhiking: No
• Plasmid clonability: decreased coverage

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCAAACG TTACTCTGAA CGTCACCGAC GCCAAGGGCC AGGCCACCGG CACCGTTGAA 
GCTCCTGAGG CTCTCTTCGG CGTTTCCGCC GAGGATGTCC AGGCTCACAT CCCGCTGATC 
CACCAGGTTG TCACCGCTCA GCTCGCTGCT GCTCGTCAGG GCACCCACGC CACCAAGACT 
CGTGGCATGG TTTCCGGCGG CGGCAAGAAG CCGTGGAAGC AGAAGGGCAC CGGTCGTGCT 
CGTCAGGGCT CCATCCGTGC ACCGCAGTGG TACCACGGCG GCACCGTGTT CGGCCCGCAG 
CCGCGTGACT ACTCTCAGCG CACCCCCAAG AAGATGAAGG CCGCAGCTCT GCGCTACGCC 
CTGTCCGATC GCGCCAACGC CGGTCGCGTT GCCGTGGTGG AGTTCGGTAT CACCGAGCCG 
TCCACCAAGG CCGCTGTCGC CGCTCTGGCC CCGATTACCG CGGACAAGTT CACCACGGTT 
GTCTTCACTC GCGACAACAT CAACGAGTGG CTCTCCGTGC GCAACATCCC GACCGTTCAC 
CCGATTTTCG TCGATCAGCT CAACACGTAC GACGTGATTA CCTCGCAGTA CGTGGTCTTC 
ACCAAGGAAG CCTTTGAGGC TTTCGTGGCT GCCAAGACCG AGCCGAAGGA GGCCTGA 

 

Protein sequence

MANVTLNVTD AKGQATGTVE APEALFGVSA EDVQAHIPLI HQVVTAQLAA ARQGTHATKT 
RGMVSGGGKK PWKQKGTGRA RQGSIRAPQW YHGGTVFGPQ PRDYSQRTPK KMKAAALRYA 
LSDRANAGRV AVVEFGITEP STKAAVAALA PITADKFTTV VFTRDNINEW LSVRNIPTVH 
PIFVDQLNTY DVITSQYVVF TKEAFEAFVA AKTEPKEA