Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1664 |
Symbol | pnp |
ID | 6364558 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 2003064 |
End bp | 2005805 |
Gene Length | 2742 bp |
Protein Length | 913 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642680860 |
Product | polynucleotide phosphorylase/polyadenylase |
Protein accession | YP_001955607 |
Protein GI | 189440526 |
COG category | [J] Translation, ribosomal structure and biogenesis |
COG ID | [COG1185] Polyribonucleotide nucleotidyltransferase (polynucleotide phosphorylase) |
TIGRFAM ID | [TIGR02696] guanosine pentaphosphate synthetase I/polynucleotide phosphorylase [TIGR03591] polyribonucleotide nucleotidyltransferase |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.123997 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGAGGGTC CCGAAATCAA GGCCGTTGAG GCCGTAATCG ACAATGGATC GTTTGGCAAG CGCACGCTGC GCTTCGAGAC CGGCCGCCTC GCCCAGCAGG CCGATGGCGC TGTGGCCGCC TACCTCGACG ACGATTCCAT GATTCTGTCC ACCACCACCG CCGGTTCCAG CCCGAAGGAG AACTACGACT TCTTCCCGCT GACCGTCGAT GTTGAAGAGA AGATGTACGC TGCCGGCAAG ATTCCGGGCT CGTTCTTCCG CCGTGAAGGC CGCCCGAGCT CCGAGGCCAT CCTCGCCTGC CGCATCATCG ACCGCCCGCT GCGCCCGCTG TTCCCGCACA CCCTGCGCAA CGAAGTGCAG GTCGTCGAGA CCGTGCTCGC CGTGAACCCT GATGACGCTT ACGATGTCAT CGCCCTGAAC GCCGCTTCCG CCTCCACTAT GATCTCCGGC CTGCCGTTCG AAGGCCCGGT CTCCGGTGTG CGTCTGGCGC TGATTGATGG CCAGTGGGTT GCCTTCCCGC GTTGGAGCGA GCGTGAGCGC GCCGTGTTCG AGATTGTGGT CGCTGGCCGC GTGATCGAGA ACGGTGATGT TGCCATCGCC ATGATCGAGG CCGGTGCCGG CAAGAACGCC TGGCACCTCA TCTACGACGA GGGTCAGACC AAGCCCGATG AGGAAGTCGT TGCCGGTGGT CTTGAGGCCG CCAAGCCGTT CATCAAGGTG ATTTGCGAGG CTCAGGACGA GCTCAAGAAG ATCGCCGCCA AGGAGACCAA GGAATTCCAG CTCTTCCCGG AGTACACCGA CGAGCTGTAC GCCCGCATCG ACGAGATCGC TCACAAGGAT CTGGACGAGG CCCTCTCCAT CGCCGAGAAG CTGCCGCGCC AGGACCGCAT CCACGAGATC AAGGAGCACG TGCGCGAGGT GCTCGCGGAC GAGTTCACCG ATATGGACGA TGCCGAGAAG GACAAGGAAC TCGGTAACGC CTTCAAGGAA CTGCAGCGCC AGATTGTGCG TCGCCGCATC CTGACCGAGG ACTACCGCAT CGACGGCCGT GGCCTGCGCG ACATCCGCAC CCTGTCCGCC GAGGTGGACA TTGTGCCTCG CGTGCACGGT TCCGCCCTGT TCCAGCGTGG CGAGACCCAG ATTCTGGGCG TCACCACGCT GAACATGCTC AAGATGGAGC AGCAGATCGA CGCGCTGTCC GGTCCGCAGT CCAAGCGTTA CATGCACAAC TACGAGATGC CGCCGTACTC CACTGGTGAG ACCGGCCGCG TCGGTTCCCC GAAGCGCCGC GAAATCGGCC ACGGCGCCCT CGCCGAGAAG GCTCTCGTGC CGGTGCTGCC GAGCCGCGAA GAGTTCCCCT ACGCCATCCG ACAGGTCTCC GAGGCCATCG GTTCCAACGG TTCCACTTCG ATGGGTTCCG TGTGCGCCTC CACGCTGAGC CTTTTGGCTG CCGGCGTGCC GCTGAAGGCT CCGGTTGCCG GCATCGCCAT GGGCCTCGTG TCCGGCGACG TTGATGGCAA GCACATCTTC AAGACCCTCA CCGATATTCT GGGTGCCGAG GATGCCTTCG GCGACATGGA CTTCAAGGTG GCCGGTACTT CCGAGTTCAT CACCGCCCTG CAGCTCGACA CCAAGCTCGA CGGCATCCCC GCCGACATCC TGGCCGCCGC TCTGCAGCAG GCCAAGGAAG CCCGCGCCAC GATTCTCGAG GTCATCAACG AGTGCATCGA CGGCCCGGCC GAGATGAGCG AGTTCGCTCC GCGCATCATC ACCACCTCCG TCCCGGTTGA GAAGATCGGC GAAGTCATCG GCCCGAAGGG CAAGATGATC AACCAGATTC AGGAAGACAC CGGCGCTGAA ATTGCCATCG AGGATGACGG TACCGTCTTC ATCTCCTCCG AGGGTGGCGA GGCTGCTGAG AAGGCCAAGG CCATCATCGA CCAGATTGCC AACCCGCACG TGCCCGAGGC CGGCGAAACC TACAACGGCA AGGTCGTCAA GACCACGTCG TTCGGCGCTT TCGTGAACCT CACCCCCGGC ACCGACGGCC TGCTGCACAT CTCCCAGATC CGCAACCTGG CCAACGGCGA GCGTATTGAC GCTGTCGAAG ACGTGCTCAA GGAAGGCGAC ACCGTTGAGG TGATCGTTCA GGGTGTCGAT GATCGCGGCA AGATCTCCCT GGCCATTCCT GGTTTCGAGG ATCAGGAGAA CAACGCCCGC CCGAGCCGTG GCGATCGCGA TGACCGCCGT GGCGGCCGTG GCCGTGGTGA CCGTGACGAT CGCCGTGGCG GCCGTGGCCG TCGCTCCGAG CGCGATGACC GTGACTTCGA CGATCGTGAC GACCGTCCGC GTCGCCGTCG CTCCGATGAC TTCGAGGATG ATTACGACGA CCGTCCGCGT CGCCGTCGCT CCGATGACCG TGACTTCGAT CGCGATGATC GCGATGATGA TCGTCCGCGT CGCCGTCGTT CTGCCGACCG TGACTTCGAC GATCGCGATG ACCGTGATGC TCGCGACTCC CGTGACGATG ATCGTCCGCG TCGCCGTCGC TCTTCCGATC GCGATGACCG TGGCGATCGT GATGACCGCC GTGGCGGTTC CCGTGGCCGT GGCCGTGGCT CGGACCGTAA CCCGCGCTAC GCCACCGACG ACAACTACGA CGACTACCGC GCCGACCGCG AAGAGCGTAC TGAGCGCCCG CGTCGCCGCG TCCGTCGCGA CTTTGATCCG TTCGAGGACT AA
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Protein sequence | MEGPEIKAVE AVIDNGSFGK RTLRFETGRL AQQADGAVAA YLDDDSMILS TTTAGSSPKE NYDFFPLTVD VEEKMYAAGK IPGSFFRREG RPSSEAILAC RIIDRPLRPL FPHTLRNEVQ VVETVLAVNP DDAYDVIALN AASASTMISG LPFEGPVSGV RLALIDGQWV AFPRWSERER AVFEIVVAGR VIENGDVAIA MIEAGAGKNA WHLIYDEGQT KPDEEVVAGG LEAAKPFIKV ICEAQDELKK IAAKETKEFQ LFPEYTDELY ARIDEIAHKD LDEALSIAEK LPRQDRIHEI KEHVREVLAD EFTDMDDAEK DKELGNAFKE LQRQIVRRRI LTEDYRIDGR GLRDIRTLSA EVDIVPRVHG SALFQRGETQ ILGVTTLNML KMEQQIDALS GPQSKRYMHN YEMPPYSTGE TGRVGSPKRR EIGHGALAEK ALVPVLPSRE EFPYAIRQVS EAIGSNGSTS MGSVCASTLS LLAAGVPLKA PVAGIAMGLV SGDVDGKHIF KTLTDILGAE DAFGDMDFKV AGTSEFITAL QLDTKLDGIP ADILAAALQQ AKEARATILE VINECIDGPA EMSEFAPRII TTSVPVEKIG EVIGPKGKMI NQIQEDTGAE IAIEDDGTVF ISSEGGEAAE KAKAIIDQIA NPHVPEAGET YNGKVVKTTS FGAFVNLTPG TDGLLHISQI RNLANGERID AVEDVLKEGD TVEVIVQGVD DRGKISLAIP GFEDQENNAR PSRGDRDDRR GGRGRGDRDD RRGGRGRRSE RDDRDFDDRD DRPRRRRSDD FEDDYDDRPR RRRSDDRDFD RDDRDDDRPR RRRSADRDFD DRDDRDARDS RDDDRPRRRR SSDRDDRGDR DDRRGGSRGR GRGSDRNPRY ATDDNYDDYR ADREERTERP RRRVRRDFDP FED
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