| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1603 |
|---|
| Symbol | |
|---|
| ID | 6362771 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 1913683 |
|---|
| End bp | 1914948 |
|---|
| Gene Length | 1266 bp |
|---|
| Protein Length | 421 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 64% |
|---|
| IMG OID | 642680794 |
|---|
| Product | putative permease |
|---|
| Protein accession | YP_001955546 |
|---|
| Protein GI | 189440465 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 10 |
|---|
| Plasmid unclonability p-value | 0.282172 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | GTGAAACCCG AGAATGACAT CGCCGGCACC GCCACCCAAC GCCCGCTGCT GTCCCGCGAC
TTCGTGCTGC TGGTCGCCGG ACAAGGCATC TCGCTGTTCG GCAATGTGAT GCTGCGATTC
GCGATGTCGA TGTGGGTGCT GGACGAAACC GGCTCAGCCA CCATCTTCGC CTCGGTGCTG
GCCATCTCCA TCGTGCCGAC CATCCTGCTC TCCCCGTTCG GAGGCGTGCT GGCCGATCGC
GTCAACCGCC GCACCATCAT GGTGGCGCTC GACGCCATCT CCGCCGTGCT CGTGCTGGCG
AGCGCCATCG TCTTCGCCAC CACGGGCTTC CATATCGTAG CCATCGCCAC CATGCAGGTG
CTGCTCGCCG TGCTCGGCGC CTTCGAAACC CCGACCGTGC AGACCGCACT CCCCCAGATG
TTCCGGCAGT ACGGCCCGGC CACCATGCGC CAAGGCATGG CCGTGATCAA TCAGGTCCAA
CAACTAAGCA GTCTGCTGCC GAGCTTCCTC GGCGGCGTGC TGTATGCGAT GTTCGGCATC
CGTCTCATGA TGATCATCGC CATCGCAAGC TTCGCCGGCG CAGCCGCGCT CGAATGCTTC
ATCCGCCTCA GTGCCCCGGA TCGCGGCGAC GAGGAGCTGC CCACCCCACT TGAAGACCTC
AAGGCAGGCG TGCGATTCCT CATCAAGGAC CGGCCGAACG TGTTCAGACT GCTGTTGTTC
GCGGCGGCGC TCAACTTTGT GCTTATCGGC TATTCCGGCG TCGGCTTCCC GTACACGATT
CGTACAGTGC TCGGCTTCGA CGCCACTGTC TACGGCATCG CCGACGGCCT GATCGGTGTT
TCCGGCGTGG CGGGCGCATT CATCGCCGGC CTGTTCGCCG CCAAGCTCAC GATGCGCTGG
CTGCCGGGGC TGATGGCGAC GCTTACGCTG GCCATGGTCC CACAGGGTAT TGTGTTCCTG
CTGCCGGTCG ACGCATGGAC CAAACTCGTG GTGCTGATCG TATTCACCTG CGGCACGATG
GTCGCCAGTT GCTTCACGAA TCTCATCGCC GTGCCCGCCA TCCAGCTCAG TACGCCCGAG
GCAATGGCCG GCAAAGTGAT GTCCATGGCC GCGGCCGTGA GCATGTGTGC CCAGCCGCTC
GGCCAGATGG TGTACGGCTG GGCCTACGAC CAAATGCCGG TCGCCATCGT GCTGTTCATC
ACCACCGCCC TGTTCGCCGT GCTCACCGTG CTGATGGTTC CGCTCGCCAA GCAGTTCGAG
GACTGA
|
|---|
| Protein sequence | MKPENDIAGT ATQRPLLSRD FVLLVAGQGI SLFGNVMLRF AMSMWVLDET GSATIFASVL
AISIVPTILL SPFGGVLADR VNRRTIMVAL DAISAVLVLA SAIVFATTGF HIVAIATMQV
LLAVLGAFET PTVQTALPQM FRQYGPATMR QGMAVINQVQ QLSSLLPSFL GGVLYAMFGI
RLMMIIAIAS FAGAAALECF IRLSAPDRGD EELPTPLEDL KAGVRFLIKD RPNVFRLLLF
AAALNFVLIG YSGVGFPYTI RTVLGFDATV YGIADGLIGV SGVAGAFIAG LFAAKLTMRW
LPGLMATLTL AMVPQGIVFL LPVDAWTKLV VLIVFTCGTM VASCFTNLIA VPAIQLSTPE
AMAGKVMSMA AAVSMCAQPL GQMVYGWAYD QMPVAIVLFI TTALFAVLTV LMVPLAKQFE
D
|
|---|
| |