| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1570 |
|---|
| Symbol | rfbA |
|---|
| ID | 6363948 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | + |
|---|
| Start bp | 1869171 |
|---|
| End bp | 1870067 |
|---|
| Gene Length | 897 bp |
|---|
| Protein Length | 298 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 58% |
|---|
| IMG OID | 642680761 |
|---|
| Product | dTDP-glucose pyrophosphorylase |
|---|
| Protein accession | YP_001955513 |
|---|
| Protein GI | 189440432 |
|---|
| COG category | [M] Cell wall/membrane/envelope biogenesis |
|---|
| COG ID | [COG1209] dTDP-glucose pyrophosphorylase |
|---|
| TIGRFAM ID | [TIGR01207] glucose-1-phosphate thymidylyltransferase, short form |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 16 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAAAGGCA TTATTCTCGC TGGAGGTTCG GGTACGAGAC TGTACCCTCT GACCACGGTG
ACCTCGAAGC AGCTGCTTCC CGTGTATGAC AAGCCGATGA TCTACTACCC GTTGAGCGTG
CTGATGATGG CGGGCATCCG TGACATTCTG ATCATCTCCA CGCCGAAGGA TCTGCCGAAC
TTCGAACGTT TGTTGGGAGA CGGCTCCCAG TATGGCGTGA GCTTCTCTTA CAAGGTGCAG
CCTTCCCCGG ATGGCCTGGC CCAGGCATTC ATCCTCGGCG AGGAGTTCAT CGATGGTGAG
CCGTGCGCGC TGGTGCTTGG TGATAACATC TTCTACGGCA ACGGTTTGGG CAGGACGCTG
CGCAAGGCCG CCACGGTGGA ACATGGTGCC ACAGTGTTCG GCTACTACGT CGACGATCCT
GAGCGATACG GCGTGGTCGA ATTCGATGAG AACAAGAAGG CCATCTCTAT CGTTGAGAAG
CCGGAGCACC CGGCCAGCAA CTATGCGGTG ACCGGCCTGT ACTTCTACGA CGAACGCGTC
ACCGAGTTCG CCAAGCAGGT CAAGCCGTCC CCCCGTGGCG AGCTGGAGAT TACCGATCTG
AACAAGATGT ATCTGGAAGA CGGCACCCTC AACGTGCAGA CGCTTGGCCG CGGCTATGCC
TGGCTGGATA CCGGTACCAT GGACTCCCTG TATGAGGCAG GCGAATTCGT GCGCACCGTG
CAGCGTGCTC AGGGCCTGCC GATCGCCGTT GCCGAAGAGA TCGCTTTTGA GAACGGTTGG
ATTACTCGTG ATGAGCTGAT GGAGGCCGCT GTGAAGTATG GCAAGAGCCC GTATGGCAAG
CATCTGAAGG ATGTGGCGGA GAACAAGATT ATTGTTAAGC CGCGCGACGT TCGATGA
|
|---|
| Protein sequence | MKGIILAGGS GTRLYPLTTV TSKQLLPVYD KPMIYYPLSV LMMAGIRDIL IISTPKDLPN
FERLLGDGSQ YGVSFSYKVQ PSPDGLAQAF ILGEEFIDGE PCALVLGDNI FYGNGLGRTL
RKAATVEHGA TVFGYYVDDP ERYGVVEFDE NKKAISIVEK PEHPASNYAV TGLYFYDERV
TEFAKQVKPS PRGELEITDL NKMYLEDGTL NVQTLGRGYA WLDTGTMDSL YEAGEFVRTV
QRAQGLPIAV AEEIAFENGW ITRDELMEAA VKYGKSPYGK HLKDVAENKI IVKPRDVR
|
|---|
| |