| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1542 |
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| Symbol | xynB1 |
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| ID | 6364357 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1831760 |
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| End bp | 1833505 |
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| Gene Length | 1746 bp |
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| Protein Length | 581 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 642680733 |
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| Product | beta-xylosidase |
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| Protein accession | YP_001955485 |
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| Protein GI | 189440404 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3507] Beta-xylosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 18 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGACCGCAA CCACCTCCAC GACCGAACCC ACGACCGAAT CGCCCGCCGA TGAACGATTC
GTCGAACACC CGCTCGCCCC GGGCCGCATC GCCATCCACG ACCCGGCCAT CGTCGAGGAC
AACGGTACGT ACTACGTCTT CGGCACCCAC CGACGCTGCG CCCGCAGTAC CGACCTCGTC
CACTGGGAAC GCTTCGAGAA CAATCTGACG CGCGACCCGG CCTCGCTGCT CGGCGGCATC
TGGGAGGCAT GGCCGAAGCA GCCGGAGAAC CCCGCGCTCG AAGGCAACAC GTGGGCACCG
GACGTGATCT GGAACGACGT GATGCGCAAA TGGTGCATGT ACCTGTCGGT CAACGGTCAC
GAATTCCGTT CGGTGATCGT GCTGCTCACC GCCGATCGTC TCGACGGCGA CTGGACATAC
GTCGGTCCTG TCGTCTACTC CGGTTTCAAC GTTGACAATG TGGGCCGCAC CGACGTGCCG
CGTGTGCTCG GCGACGAGGC CGCGCATGGC GATCTGTCAC GGTATGCATC GTTGAAGGAT
ACGCGGATCA ACGCGATCGA CGCCGCGCCG ATCCGCTGCG ATCACGGCGA ACTGTGGATG
AGTTTCGGCT CGTGGTTCGG CGGCATCTGG ATGTTCAAGC TCGATCCGAA AACCGGTCTG
CGCGACTACA GCGTGCGCTA TCCGCTCGTC CACGATTCCG CCGACCCGTA CTACGGCGTG
AAGGTCGCCG GCGGCTACTG GAACTCCGGC GAAGGCTCGT ATTTCGTGCA CCGCAACGGC
TGGTGGTATC TGTTCATGGC GTATGGATGG CTCGGCCGCA CCGGCGGCTA CCAGATCCGT
CTGTTCCGTT CGCGCAACCT CGTCGGCCCG TACGTCGATC AGAACGGCAA CCCCGCGATT
TCCAACGGTG AAATCCCCGA CAATCAGACC AAGGACACCG GCATCCGACT CACGTCGTCG
GTGAAATGGA GCGGCGGACC GGCCGACGAC GATACGGTCG AAGTGTCACA GGGACACAAT
TCCGTACTCA CGCGCGGTTC GGACGGCCGA CTGTTTCTCA CGTACCATAC GCGGTTCATC
GACCGCGGCG ACGAGGATTA CGAGACGCAT GTGCGCGAGC TGCTGCCGAC CGCGGACGGT
TGGCTGACGG CCGCGCCGTA CGAGTATCGC GGCTCGGCAG CCGTCCCGCC GACCGCCGCG
AACACGTCCG ATCCGACCGT CGGCGACGAC GATGACGGCC TCGGCGATTA CATCGTTGCA
TCCAGCAGTG CGCCGAACTT GGCCGCCCGA TCATGCCACT GCGTCCGCCC CGTACACGAA
TCGGATCTCG CACACCCATC GCTGGTGTCC GGCGACTACG AATTCGTACG TCACGATCCG
CACGCGTATT TCAACGGCAC GCGCAACGCG GACGGCACGT GGCATGGCGT GAATCTGCCC
GAGACGATCA CGCTGCAGCC GGACGGCCGC GTGACCAGCG GCGGCGTGGT CGACTTCTTC
GATACGCCGG ACGCGAACCT GCCGCGGTCG ACCGACGGCC CCGTGTCGCG AGGATCGTGG
CGGATGCTCG GCGCGACGCC AGCCGGCGTG CACTGCTGCG ACAGCGACAT GGCGATCACG
ATCGACGGCA TGACGTACAC CGGCGTGTTC GCCGTACTAC CGAGGGAGAC CGATGGCCGG
GCGACGCTGA CGTTCTCCGC GATCGGCGGC AATCAAGCAA TCTGGGGCGC CCGCATCGAG
GGCTGA
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| Protein sequence | MTATTSTTEP TTESPADERF VEHPLAPGRI AIHDPAIVED NGTYYVFGTH RRCARSTDLV
HWERFENNLT RDPASLLGGI WEAWPKQPEN PALEGNTWAP DVIWNDVMRK WCMYLSVNGH
EFRSVIVLLT ADRLDGDWTY VGPVVYSGFN VDNVGRTDVP RVLGDEAAHG DLSRYASLKD
TRINAIDAAP IRCDHGELWM SFGSWFGGIW MFKLDPKTGL RDYSVRYPLV HDSADPYYGV
KVAGGYWNSG EGSYFVHRNG WWYLFMAYGW LGRTGGYQIR LFRSRNLVGP YVDQNGNPAI
SNGEIPDNQT KDTGIRLTSS VKWSGGPADD DTVEVSQGHN SVLTRGSDGR LFLTYHTRFI
DRGDEDYETH VRELLPTADG WLTAAPYEYR GSAAVPPTAA NTSDPTVGDD DDGLGDYIVA
SSSAPNLAAR SCHCVRPVHE SDLAHPSLVS GDYEFVRHDP HAYFNGTRNA DGTWHGVNLP
ETITLQPDGR VTSGGVVDFF DTPDANLPRS TDGPVSRGSW RMLGATPAGV HCCDSDMAIT
IDGMTYTGVF AVLPRETDGR ATLTFSAIGG NQAIWGARIE G
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