Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1349 |
Symbol | htpX |
ID | 6363019 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1558897 |
End bp | 1559835 |
Gene Length | 939 bp |
Protein Length | 312 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642680532 |
Product | heat shock protein htpX |
Protein accession | YP_001955292 |
Protein GI | 189440211 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0501] Zn-dependent protease with chaperone function |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 32 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATGCCA AAGTACGGGT GCACGGCCAT TTCAACGGCC TGAAAACAAC GCTGCTGTTT GCCCTGATGT GGGCCATCAT CATGCTGATT TGGTGGGCCA CGGGCGGCAG TCGGCAAACC CTGAGCATCT ATATCGTCAT CGGCCTGATT ACCACGTTCG GCACCTACTG GTTCTCCGAC AAACTCGCCA TCGCCTCCAT GGGCGCGCGG GAAGTCAGCG AGCAGGAAGC CCCGGAGATC TACCAGATTG TGCGTGAACT GAGCGCCAAG GCCGGCAAGC CGATGCCTCG CATCTACATC GCCCCCACCA TGAGCCCGAA CGCCTTCGCC ACCGGGCGCA ACGAACGGCA CGCGGCCGTC TGCTGTACCC AAGGCATCCT GCAGATTCTC AACGCCCGTG AACTGCGTGG TGTGCTGGGC CACGAACTTA TGCACGTGTA CAACCACGAC ATCCTGACTT CCGCCATCGC CTCTGCCATG GCCACTGTCA TCTCCTACCT TGGCTATTCG CTGATGTATT TCGGTGGCGG CTCGCGAGAC GACCGCGATA GTTCCGGTGG CCTCGGCCTG ATCGGCGCAT TGCTGAGCGT GATTCTCGCG CCGATTGCCG CGTCTTTGAT CCAGATGGCC ATCTCCCGCA CCCGCGAATA CGACGCCGAT GAAGACGGCA GCTTGCTCAC CGGCGATCCC GAGGCCCTGG CTTCCGCGCT GAACAAGATT TCCTACGGCG CACAGACCGC GCCGATGCGC AAAACCGCCG GCACCCAGTC CGTCTCCGCA ATGATGATCG CCAACCCGTT CTCCGCGGTC GGTTTCTCGC GCTTGTTCTC CACGCACCCG CCGACCGATG AGCGCATAGC GCGTCTCATG CAGATGGCCA ACGAAATGAA CGGCACGCCG ATCGCTCCGC CCACCTACTC CACGCGCGTC GGCAGGTGA
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Protein sequence | MDAKVRVHGH FNGLKTTLLF ALMWAIIMLI WWATGGSRQT LSIYIVIGLI TTFGTYWFSD KLAIASMGAR EVSEQEAPEI YQIVRELSAK AGKPMPRIYI APTMSPNAFA TGRNERHAAV CCTQGILQIL NARELRGVLG HELMHVYNHD ILTSAIASAM ATVISYLGYS LMYFGGGSRD DRDSSGGLGL IGALLSVILA PIAASLIQMA ISRTREYDAD EDGSLLTGDP EALASALNKI SYGAQTAPMR KTAGTQSVSA MMIANPFSAV GFSRLFSTHP PTDERIARLM QMANEMNGTP IAPPTYSTRV GR
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