| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_1339 |
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| Symbol | abfA3 |
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| ID | 6363517 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 1547540 |
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| End bp | 1549087 |
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| Gene Length | 1548 bp |
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| Protein Length | 515 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 642680521 |
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| Product | alpha-L-arabinofuranosidase |
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| Protein accession | YP_001955282 |
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| Protein GI | 189440201 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG3534] Alpha-L-arabinofuranosidase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCCCAGC AGGACCATCT GACCGCACGT CTCGTCGTCG ATGACGATTT TGAGGTCGCT
CCGGTCAACA ATCGTCTGTT CGGTTCGTTC GTCGAGCACC TTGGCCGTTG CGTGTACACC
GGCATCTACG AGCCCGACCA CCCGACCGCC GACGAGCACG GCTTCCGCAA GGACGTCATC
GACCTGGTCA AGGAACTCGG CGCCACCACC ATCCGCTACC CGGGCGGCAA CTTCGTGTCC
GGCTACCGCT GGGAGGACGG CATCGGCCCC AAGCAGGAAC GTCCCCGTCG ACTCGATCTG
GCCTGGCATT CCAGCGAAAC CAACGAATTC GGCCTGCACG AGATGGCCGA ATGGCTTGAG
GCCACCGGCG GCAACGAGCT GATGGAGGCC GTCAACCTGG GCACGCGCGG CCTGCAGGAG
GCCCTGGACC TGCTGGAGTA CGCGAACGTG CCCGGCGGCA CCGAGCTGTC GGAACGTCGC
CGCGCCAACG GCGCCGACAA GCCGTTCGAT ATCCGCATGT GGTGCCTGGG CAACGAGATG
GACGGCCCGT GGCAGCTCGG CCACAAGTCC GCCGAGGACT ACGGCATGCT CGCCGCCTCC
GTGGCCGCCG GCATGCGCCA GATCGATCCG GATGTGGAAC TGGTGGTGTG CGGCTCCTCC
GCCCATGGCA TGCCGACCTT CGGCAAGTGG GAGCAGACCG TTCTTGAGAA GACCTACGAG
AACGTGAACT TCGTCTCCTG CCACGCCTAC TACCAGCCGT TCTTCAAGGA GGACGGCACG
CGCGACATGG CCAGCTTCCT GGCCTCCGGC GTGGATATGG ACGGCTTCAT CAAGGACGTG
GCCGCCACCA TCGACGCCAC CAAGGCCCAT CTGAAGAGCG CGCACGACGT GTACATCTCG
TTCGATGAAT GGAATGTCTG GTACCAGGGT GAGGAGCCGA GCAAGACCCC CGAGGGCATC
GGCAACTGGC CGGTGGCCCC GCGTCTGCTG GAGGACATCT ACACCGCCGC CGACGCCGTG
GTGTTCGGCG ATCTGATGAT CACGCTGCTC AAGAACGCCG ACCGCGTGCG CGCCGCCAGC
CTGGCGCAGC TGGTCAATGT CATCGCCCCG ATCATGACGG AGCCGGGCGG CCCGGCCTGG
CGCCAGACCA CGTTCCACCC GTTCTCCGTG ACCGCGCGCC TGGCCAAGGG CGGCACCGTG
CTGGAGCCGA AGCTGTCCGC CGGCACCGTG GATACGCCGC GCTATGGCGA GGTCGACGGC
GTGAACGCCG TGGCCGTGCG CTGCGCCGAC GGCTCGCTCG CCGTGTTTGC GGTGAACCGT
TCGCTCGAGG CGACCGCCGA GTTCGAGATC AGGCTGCAGG ACGGCGCGCA GCCGGCATCC
GTCGAGGCGC AGACGCTGCA CGACGACGAT CTGTTCGCCG CGAATACGCT CTACGACCAG
AACCGTGTGA CCCCGCACGC CAACGGGTCG GCCATGTACG ATGCCGAGTC CGGCGTGGTC
CGCGTCTCCC TGCCGCCGGT GAGTTGGACC GCCCTGCACA TCAAGTGA
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| Protein sequence | MPQQDHLTAR LVVDDDFEVA PVNNRLFGSF VEHLGRCVYT GIYEPDHPTA DEHGFRKDVI
DLVKELGATT IRYPGGNFVS GYRWEDGIGP KQERPRRLDL AWHSSETNEF GLHEMAEWLE
ATGGNELMEA VNLGTRGLQE ALDLLEYANV PGGTELSERR RANGADKPFD IRMWCLGNEM
DGPWQLGHKS AEDYGMLAAS VAAGMRQIDP DVELVVCGSS AHGMPTFGKW EQTVLEKTYE
NVNFVSCHAY YQPFFKEDGT RDMASFLASG VDMDGFIKDV AATIDATKAH LKSAHDVYIS
FDEWNVWYQG EEPSKTPEGI GNWPVAPRLL EDIYTAADAV VFGDLMITLL KNADRVRAAS
LAQLVNVIAP IMTEPGGPAW RQTTFHPFSV TARLAKGGTV LEPKLSAGTV DTPRYGEVDG
VNAVAVRCAD GSLAVFAVNR SLEATAEFEI RLQDGAQPAS VEAQTLHDDD LFAANTLYDQ
NRVTPHANGS AMYDAESGVV RVSLPPVSWT ALHIK
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