Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1334 |
Symbol | |
ID | 6363576 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1542772 |
End bp | 1543737 |
Gene Length | 966 bp |
Protein Length | 321 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 642680516 |
Product | Integrase |
Protein accession | YP_001955277 |
Protein GI | 189440196 |
COG category | [L] Replication, recombination and repair |
COG ID | [COG4973] Site-specific recombinase XerC |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 14 |
Plasmid unclonability p-value | 0.93106 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGACCCA CGGAACACGG ATTCGTCGGC CCGCTCGCCG GCGAATTGGA GGAGTACATC CGCTTCAAGG CGTCCATGGG CAGGCATGGC GCCACCCGCG TCCGGGTCCT GCGCTCGTTC GACCGGCATT GCCTCGAACA CGGGGCCGTG CGTCTGGAGC GGGGCGTCGT GGAGCGATGG ATCGCCCATA GGATCGACGC GAATCCCGGG GGTTGCCGCT CGTGGTTCTC GTACATCAGG GACTTCGGCA GGTGGATGCG ACTGGCCCAC GATCCCGACG CGTACGTGCT CTCCGACCAG TGGAAGGCCG GATCCCCGCG TCCGACGCCG TACCTGCTGA CGGACCGCGA GGCCGCCCTG TTCCTGCGGG CCGCGGGAAC GTTGGAGTCT CCGTCGCCGT GGGCGTGGCA GTCTCGCGCG TTCTTCATGC TCATGGCCTG CTGCGGGCTG CGCACCCGAG AGGTCAGGAG ACTCGCCGTC GGGCACGTCG ACCACAAGGC CCGTTCCATC GACGTGGTCG ATTCCAAGGC CGGTCGCAGC CGCAGGCTGC CCGTGGGCGA CGAGGTCGCC GCCGAACTGC TGGAATGCGA CCAACGGTCC CGCGAACGCT TCGGAGACGA CCGTCCCGCG TTCTTCGTCA CCTCCACCGG CAATCCGGTC TCCCCGGGCA TGCCCGGCGT GGTGTTCCGC CGCGTCTGGA CGCGGGCCGG GCTCGAGTGG CCACAAGCCG GCAAACGGCC CAGGCCCTAT GATTTCCGGC ACCGGTTCGC GTTCGCGAAC ATCGAGCGGT GGACTCGCGA CGGCGTGGAC GTGATGGCGA TGCTGCCCTA TCTGGCGGCC TACATGGGAC ACGCCGGCAT CGACAGCACC CTCTACTACG TGCACGCCAG CCCCGATTTC ATGGACGGAT ACGCGGACCT CGTCGCCGAC GCCGAACGTG TGGTCCCGGA AACGGAGGAA CCATGA
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Protein sequence | MRPTEHGFVG PLAGELEEYI RFKASMGRHG ATRVRVLRSF DRHCLEHGAV RLERGVVERW IAHRIDANPG GCRSWFSYIR DFGRWMRLAH DPDAYVLSDQ WKAGSPRPTP YLLTDREAAL FLRAAGTLES PSPWAWQSRA FFMLMACCGL RTREVRRLAV GHVDHKARSI DVVDSKAGRS RRLPVGDEVA AELLECDQRS RERFGDDRPA FFVTSTGNPV SPGMPGVVFR RVWTRAGLEW PQAGKRPRPY DFRHRFAFAN IERWTRDGVD VMAMLPYLAA YMGHAGIDST LYYVHASPDF MDGYADLVAD AERVVPETEE P
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