Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1328 |
Symbol | |
ID | 6363570 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 1533575 |
End bp | 1534885 |
Gene Length | 1311 bp |
Protein Length | 436 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642680510 |
Product | putative permease |
Protein accession | YP_001955271 |
Protein GI | 189440190 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2814] Arabinose efflux permease |
TIGRFAM ID | [TIGR00883] metabolite-proton symporter |
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Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | TTGGTACGCG ATTCGGTCAA GACCGTGATC GCCGCGTCGA TGGTCGGTAC CGCCATCGAA TTCTATGACT TCTACGCCTA CGGCACCGCC GCGGCAAACT ACTTCCCGCA CATCTTCTTC TCCGCGAAGG ACAACCCCAC CGTCGCACTG CTGATGAGCT TGCTGACCTT CGCCGTCGCC TTCATCGCCC GCCCGCTGGG CTCGCTGATC TTCGGCCACT TCGGCGATCG CATGGGCCGC AAGACCACGC TGGTCGTCAG CCTGATGACC ATGGGTGTCG GCACCTTCCT GATTGGCTGC CTGCCCACCT ACGATCAGGT CGGCGTTGGT GCAGTCGCCA TCCTCTGCCT GCTGCGTTTC CTCCAGGGCA TCGGCCTGGG CGGCGAATGG TCCGGCGCGG CACTGGTCGC CACCGAGAAC GCGCCTGAAG ACAAGCGCGC ACTGTACGGC TCCTTCCCGG AGCTTGGCGC CCCGATCGGC TTCTTCCTGT CCAACGGCAC CTACTTCGTG CTCGAATCCT TCAACAATCA GGACGCGATG CTGGCTTGGG GCTGGCGTGT GCCGTTCCTG CTGTCCGCCA TCCTGGTGAT CGTCGGTCTC GTGGTCCGCG TTCACATGGA GGAGACCCCG ATCTTCCGTA TGGCTCAGGA GCAGAAGAAG GTTGTCAAGT CCCCGCTGAC CGAGGTCTTC CGCAAGTCTT GGCGTCAGGT GCTGCAGGCC ACCTTCCTTG TGGCTGTGAC CTACACGCTG TTCTACACGC TCGCCACCTG GTCCCTCGCT TGGGGCACCA AGGAGCAGGG CGAAGGCGGC GGCAACCTTG GCTTCACCAA CCAGGAATAC CTGCTCATGC TCATGATCTC CATCTGCGTG TTCGCCCTGT TCATCGTGCT GTCCTGCCTG TACGCGGACA AGATCGGCCG CCGTCGCGTG CTGACCTTCT CCTCCTGCGC ACTTGTGGTG TTCGCCGTAC TCTTCCCGTT CCTGCTGGAC GGTGGTCTGG TCGGCCAGAA GAACTTCTTC GCCAACATGG TGTTCCTGTG CGTCGGCTTT GCCCTGATGG GCATCGCCTT CGGCCCGATC GGCGCCTTCC TGCCTGAGCT GTTCGACGCC AACGTGCGTT ACTCCGGCTC CGGCATCGGC TACAACCTGG CCGCCATCGT CGGCGCGGCT TTCGTGCCGA CCATCGCCAC TTGGCTGAGC TCCCACTGGG GCGTCCACTC CGTGGGCCTC TACCTTGCCG TGATGGCCGT GTGCTGCCTC GTCTCCGTGC TCACCTGCAA GGAGACTAAG GACGTTGACT TTACCAAGTG A
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Protein sequence | MVRDSVKTVI AASMVGTAIE FYDFYAYGTA AANYFPHIFF SAKDNPTVAL LMSLLTFAVA FIARPLGSLI FGHFGDRMGR KTTLVVSLMT MGVGTFLIGC LPTYDQVGVG AVAILCLLRF LQGIGLGGEW SGAALVATEN APEDKRALYG SFPELGAPIG FFLSNGTYFV LESFNNQDAM LAWGWRVPFL LSAILVIVGL VVRVHMEETP IFRMAQEQKK VVKSPLTEVF RKSWRQVLQA TFLVAVTYTL FYTLATWSLA WGTKEQGEGG GNLGFTNQEY LLMLMISICV FALFIVLSCL YADKIGRRRV LTFSSCALVV FAVLFPFLLD GGLVGQKNFF ANMVFLCVGF ALMGIAFGPI GAFLPELFDA NVRYSGSGIG YNLAAIVGAA FVPTIATWLS SHWGVHSVGL YLAVMAVCCL VSVLTCKETK DVDFTK
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