Gene BLD_1238 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1238 
Symbol 
ID6363579 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1418022 
End bp1418843 
Gene Length822 bp 
Protein Length273 aa 
Translation table11 
GC content60% 
IMG OID642680415 
ProductAcrR family transcriptional regulator 
Protein accessionYP_001955181 
Protein GI189440100 
COG category[K] Transcription 
COG ID[COG1309] Transcriptional regulator 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones21 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGACGTCGC TGCAGCGCCG CGAGCAGCTG ATTGAAGTCG GACGCTCGCT ATTCGCCGCC 
AAAGGCTTCG AAGCGGTAAG CGTGGAGGAA ATCGCCGCGC ACGCCAAAGT CTCCAAGCCG
ATTGTGTATG AGCATTTCGG CGGCAAAGAG GGCCTGTATG CCGTCATTGT GGATCGTGAG
ATGCGCGCGC TGACCGGTAC GCTGACCGCC GCGCTCGACG ATCCGACCGT GCACCCGCGC
CAGATTGTGG AACGCACGGC GCTTGCGCTC CTCACCTATA TCGAAGAGAA TGCCGAGGGG
TTCCAGGTAC TGGTACGCGA CTCGCCGAGC ACCGACCCGT CCGGCTCATT CAGCTCGCTG
ATGGGAGACA TCGCCGTACG CGTTGAAGAC ATTCTTTCCG AAACATTCAA ACGGCAGAAG
CTGTCTGCCA AGGGCGTGCC GTACTACGCG CAGATGCTGG TGGGCATGAC CGTATTCACC
GGGCAGTACT GGGCCGACCG GCCAAAGGTG AGCAAGGAGC AGCTGGCTGC ATACATTGTG
GATTTGGCCT GGCATGGCCT GAGCCGGCTT GACTCCAAGC CCCAGTTGTT CTTTGAGGGC
GCCAAGGCGC GGAAGGAGGC CGAGCGCCGA GCCAAGCGCG AGTCCGATTC CGGCAGCCCG
GATTCAGACC AGACGAGTTC TGCCCAATCG GATCCCGAGC ACGCCACCGG GGAAGATTCA
GGGTTGCAGA ACATGAGTTC AGGGGCACAG GTTACGCAAC ACTCTGCCGA GTCGGGAGAC
GAAGTGCTAC GGTTTGAACA GGAAACTGAA CATAACGACT AA
 
Protein sequence
MTSLQRREQL IEVGRSLFAA KGFEAVSVEE IAAHAKVSKP IVYEHFGGKE GLYAVIVDRE 
MRALTGTLTA ALDDPTVHPR QIVERTALAL LTYIEENAEG FQVLVRDSPS TDPSGSFSSL
MGDIAVRVED ILSETFKRQK LSAKGVPYYA QMLVGMTVFT GQYWADRPKV SKEQLAAYIV
DLAWHGLSRL DSKPQLFFEG AKARKEAERR AKRESDSGSP DSDQTSSAQS DPEHATGEDS
GLQNMSSGAQ VTQHSAESGD EVLRFEQETE HND