Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1090 |
Symbol | |
ID | 6364612 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1281175 |
End bp | 1282452 |
Gene Length | 1278 bp |
Protein Length | 425 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642680261 |
Product | putative permease |
Protein accession | YP_001955034 |
Protein GI | 189439953 |
COG category | [R] General function prediction only |
COG ID | [COG2270] Permeases of the major facilitator superfamily |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 7 |
Plasmid unclonability p-value | 0.0778903 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGACTGATC CCACGAATGT CCACGAACCG GTGCCGCAAA GCGCCAAACT GACCGCCCGC GAGAAGAAGT GGATCATCTA CGACGTCGGC AACTCGGCAT TCGTGCTGCT GTCCACCGCC GTCATCCCCA TTTACGCCAA ATCGCTGATG CCGGCGGACG GCAACATCGT GTCCGCCTGG GGCTACGCGC AAACCATTGC TTCCTTGGTC ATCGCGCTGC TCATGCCGTT GCTCGGCTCC ATCGCCGACG TGCAAGGCAT GAAAATCAAG TTCTTCCTTG GCTTCTTCGG CACTGGCGTG GTCACCTGCT GCGCAATGGC CCTGCCCCTG ACCTGGCTAC CGTTCCTAGT CGTCTACATT CTGGCGACCA TCGGCCTCAA CGGCTCGCTA ACGTTCTACG ATTCGATGCT CATCGACGCC ACCTCGAACG AGCGCATGGA CAAGGTCTCC TCGCATGGCT ACGGCTGGGG CTACATCGGC TCCACCGTGC CGTTCATCTT CTGCATCGCG CTGATCTTCG GCGGCCCGTC GCTCTTCGAC TGGTCCACGG TGGCTTGCAC GCGCGCCTCG TTCATCATCA CCGCCATCTG GTGGGTGGCA TTCACCATCC CGCTGCTTAC CAGCTACCGC CAAGTGCACT ATCGCGCCAC CCGTGACCAG CTGGGCTCGG CCGTGCGCGG CACGTTCAGC GAACTGGCGG GCACGTTCGG CAAAATCGTG AAGAACAAGC CGTTGTGGAT GTTCATGATC GCGTTCTTCT TCTACATCGA TGCCGTGAAC ACGGTGATTT CGATGAGTAC CTCCTACGGT GCCGAGCTTG GCATCGACTC CACCCAGCTG GTGGTGGCAC TGCTCGTCAC GCAGTTCGTG GCCTTCCCCT GCGCGATTTT GTACGGCCGA CTGTCCGGCC GGTTCGGCAG CAAGACGATG ATCACGGCCG CAGTCGTGGC ATACATGTGC ATCGTGTTCT TTGCCTCGTT CTTTCTGAAG TCGGCCGCGG AGTTCTGGAT TCTGGCGATT CTGGTCGGCA TGTTCCAGGG CGGCATCCAG GCGCTCTCCC GCTCGTACTA CGGCAAGATC ATTCCCAAGA ATCACGCCAA CGAGTATTAC GGCTTCTACG ATATCTTCGG CAAGACCGCC TCAATCATCG GCACTTTCCT GGTGGCCACC ACCACCTCCC TGACCGGCAA CGCCTCGCTC GGCGTGCTCT CCATCGCCGT CCTGCTCGTC GTGGCGCTGG CCTTCCTGCT CCTGCAAAAG GACCCGACGC GGGAGTGA
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Protein sequence | MTDPTNVHEP VPQSAKLTAR EKKWIIYDVG NSAFVLLSTA VIPIYAKSLM PADGNIVSAW GYAQTIASLV IALLMPLLGS IADVQGMKIK FFLGFFGTGV VTCCAMALPL TWLPFLVVYI LATIGLNGSL TFYDSMLIDA TSNERMDKVS SHGYGWGYIG STVPFIFCIA LIFGGPSLFD WSTVACTRAS FIITAIWWVA FTIPLLTSYR QVHYRATRDQ LGSAVRGTFS ELAGTFGKIV KNKPLWMFMI AFFFYIDAVN TVISMSTSYG AELGIDSTQL VVALLVTQFV AFPCAILYGR LSGRFGSKTM ITAAVVAYMC IVFFASFFLK SAAEFWILAI LVGMFQGGIQ ALSRSYYGKI IPKNHANEYY GFYDIFGKTA SIIGTFLVAT TTSLTGNASL GVLSIAVLLV VALAFLLLQK DPTRE
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