Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_1050 |
Symbol | ffh |
ID | 6363006 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 1235457 |
End bp | 1237091 |
Gene Length | 1635 bp |
Protein Length | 544 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 642680221 |
Product | signal recognition particle GTPase |
Protein accession | YP_001954994 |
Protein GI | 189439913 |
COG category | [U] Intracellular trafficking, secretion, and vesicular transport |
COG ID | [COG0541] Signal recognition particle GTPase |
TIGRFAM ID | [TIGR00959] signal recognition particle protein |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 20 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | TTGACAGACA GACTCTCGAA TGCGTTCAAG CATCTGAAGA GCAAGGGCAA GCTTTCCGAG GCGGATATCG ACGGCACGAT CCGTGAAATC CGCCGCGCGC TGCTCGACGC CGACGTGGCG CTCGACGTGG TGCGTTCCTT CACCGGCAAG GTGCGTGAGC GTGCACTGGG CACCGAGGTG TCCGACGCAC TCAACCCCGC CCAGCAGGTG GTGAAAATCG TCAACGAGGA GCTCACCGAC GTGCTCGGCC AAGGCGTCGA CCGTCCGCTG AACTTCGCGA AGAACCCGCC GACGATCATC ATGCTCGCCG GCCTTCAGGG TGCCGGTAAA ACCACGCTGG CCGGCAAGCT CGGCTACTGG CTCAAGGATT CCGGCCACAC GCCGCTGCTG GTGGCGGCCG ATTTGCAGCG TCCGAACGCG GTGACGCAGC TGCAGGTGGT CGGCGAACGC GCCGGCGTGC CCGTCTATGC TCCCGAAAAG GGCGTCCAAT CCGATGGCGG CGAGGCCGTC GCAGCTCCGG GCCAGACCTC CGGCGACCCG GTGAAGGTGG CCCGCGATTC CATCGAACTC GCCAAGCAGA AGCTCTACGA CACGGTGATC ATCGATACCG CCGGTCGTCT GGGCGTGGAC GAGGAGCTGA TGAAGCAGGC TCGCGACATT CGCGATGCCG TGCGTCCCAA CGAAATCCTG TTCGTCATCG ACGCGATGAT CGGCCAGGAC GCCGTCAAGA CCGCCAAGGC CTTTGACGAG GGCGTGGACT TCACCGGCGT GGTGCTCTCC AAGCTCGATG GCGACGCCCG CGGTGGTGCC GCGCTGTCCG TGGCGTCCGT GACCGGCAAG CCGATCCTGT TCGCCTCCAA CGGTGAGGGC CTGAAGGACT TCGAGGTCTT CCACCCGGAC CGCATGGCCT CGCGTATCCT CGACATGGGC GACATCATGA CGCTCATCGA GCAGGCGCAG AAGCAGTTCG ATGAGGAAGA GGCCCGCAAG GCCGCCGAGA AAATCTCCGA AGGTTCCTTC GGCCTGGACG ACTTCCTCGA TCAGCTGCAG CAGGTGCGCA AGCTGGGCTC AATGAAGTCG CTGCTCGGCA TGATTCCGGG CATGGCCCAG CACCGCAAGG AACTCGAGCA GTTCGATGAG AGGGAAATCG ACCGCACCGA GGCGATTATT CGCTCGATGA CCCCGGCCGA GCGCCGCGAT CCGTCGATTA TCAATGGTTC CCGCCGCGCC CGTATCGCCT ATGGTTCCGG CGTGACGGTT TCTCAGGTGA ACGCTTTGCT GCAGCGTTTC GAGCAGGCCG CAAAGATGAT GAAGCGCATG TCCAATCGTG GCGGCATGGG CGGCGGCATC CCCGGCTTCG GCGGCCCGGC TATGGGCGGC GGCAAGAAGA AGGGCAAGAA CAAGAAGAAG GGCGGCAAGT CCGGCAATCC GATGAAGCGC GAGGCCGAGG AGAAGGCATT GCGCGATAAG CTGGCCGGCA AGTCCTCCGG TTCGACCGGC GGTTCCGCCT TCGCCAAGAA GCCACAGAAC CCGGCCCTGC CCGCTGGCCT TGAGCAGATG ATGGGCAACG TCGACGGTGG CACTGAACTG CCGCCGAACC TCGGCGGAGG CCTTGGCGGA CTGTTCGGTC GCTGA
|
Protein sequence | MTDRLSNAFK HLKSKGKLSE ADIDGTIREI RRALLDADVA LDVVRSFTGK VRERALGTEV SDALNPAQQV VKIVNEELTD VLGQGVDRPL NFAKNPPTII MLAGLQGAGK TTLAGKLGYW LKDSGHTPLL VAADLQRPNA VTQLQVVGER AGVPVYAPEK GVQSDGGEAV AAPGQTSGDP VKVARDSIEL AKQKLYDTVI IDTAGRLGVD EELMKQARDI RDAVRPNEIL FVIDAMIGQD AVKTAKAFDE GVDFTGVVLS KLDGDARGGA ALSVASVTGK PILFASNGEG LKDFEVFHPD RMASRILDMG DIMTLIEQAQ KQFDEEEARK AAEKISEGSF GLDDFLDQLQ QVRKLGSMKS LLGMIPGMAQ HRKELEQFDE REIDRTEAII RSMTPAERRD PSIINGSRRA RIAYGSGVTV SQVNALLQRF EQAAKMMKRM SNRGGMGGGI PGFGGPAMGG GKKKGKNKKK GGKSGNPMKR EAEEKALRDK LAGKSSGSTG GSAFAKKPQN PALPAGLEQM MGNVDGGTEL PPNLGGGLGG LFGR
|
| |