Gene BLD_1050 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_1050 
Symbolffh 
ID6363006 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp1235457 
End bp1237091 
Gene Length1635 bp 
Protein Length544 aa 
Translation table11 
GC content64% 
IMG OID642680221 
Productsignal recognition particle GTPase 
Protein accessionYP_001954994 
Protein GI189439913 
COG category[U] Intracellular trafficking, secretion, and vesicular transport 
COG ID[COG0541] Signal recognition particle GTPase 
TIGRFAM ID[TIGR00959] signal recognition particle protein 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
TTGACAGACA GACTCTCGAA TGCGTTCAAG CATCTGAAGA GCAAGGGCAA GCTTTCCGAG 
GCGGATATCG ACGGCACGAT CCGTGAAATC CGCCGCGCGC TGCTCGACGC CGACGTGGCG
CTCGACGTGG TGCGTTCCTT CACCGGCAAG GTGCGTGAGC GTGCACTGGG CACCGAGGTG
TCCGACGCAC TCAACCCCGC CCAGCAGGTG GTGAAAATCG TCAACGAGGA GCTCACCGAC
GTGCTCGGCC AAGGCGTCGA CCGTCCGCTG AACTTCGCGA AGAACCCGCC GACGATCATC
ATGCTCGCCG GCCTTCAGGG TGCCGGTAAA ACCACGCTGG CCGGCAAGCT CGGCTACTGG
CTCAAGGATT CCGGCCACAC GCCGCTGCTG GTGGCGGCCG ATTTGCAGCG TCCGAACGCG
GTGACGCAGC TGCAGGTGGT CGGCGAACGC GCCGGCGTGC CCGTCTATGC TCCCGAAAAG
GGCGTCCAAT CCGATGGCGG CGAGGCCGTC GCAGCTCCGG GCCAGACCTC CGGCGACCCG
GTGAAGGTGG CCCGCGATTC CATCGAACTC GCCAAGCAGA AGCTCTACGA CACGGTGATC
ATCGATACCG CCGGTCGTCT GGGCGTGGAC GAGGAGCTGA TGAAGCAGGC TCGCGACATT
CGCGATGCCG TGCGTCCCAA CGAAATCCTG TTCGTCATCG ACGCGATGAT CGGCCAGGAC
GCCGTCAAGA CCGCCAAGGC CTTTGACGAG GGCGTGGACT TCACCGGCGT GGTGCTCTCC
AAGCTCGATG GCGACGCCCG CGGTGGTGCC GCGCTGTCCG TGGCGTCCGT GACCGGCAAG
CCGATCCTGT TCGCCTCCAA CGGTGAGGGC CTGAAGGACT TCGAGGTCTT CCACCCGGAC
CGCATGGCCT CGCGTATCCT CGACATGGGC GACATCATGA CGCTCATCGA GCAGGCGCAG
AAGCAGTTCG ATGAGGAAGA GGCCCGCAAG GCCGCCGAGA AAATCTCCGA AGGTTCCTTC
GGCCTGGACG ACTTCCTCGA TCAGCTGCAG CAGGTGCGCA AGCTGGGCTC AATGAAGTCG
CTGCTCGGCA TGATTCCGGG CATGGCCCAG CACCGCAAGG AACTCGAGCA GTTCGATGAG
AGGGAAATCG ACCGCACCGA GGCGATTATT CGCTCGATGA CCCCGGCCGA GCGCCGCGAT
CCGTCGATTA TCAATGGTTC CCGCCGCGCC CGTATCGCCT ATGGTTCCGG CGTGACGGTT
TCTCAGGTGA ACGCTTTGCT GCAGCGTTTC GAGCAGGCCG CAAAGATGAT GAAGCGCATG
TCCAATCGTG GCGGCATGGG CGGCGGCATC CCCGGCTTCG GCGGCCCGGC TATGGGCGGC
GGCAAGAAGA AGGGCAAGAA CAAGAAGAAG GGCGGCAAGT CCGGCAATCC GATGAAGCGC
GAGGCCGAGG AGAAGGCATT GCGCGATAAG CTGGCCGGCA AGTCCTCCGG TTCGACCGGC
GGTTCCGCCT TCGCCAAGAA GCCACAGAAC CCGGCCCTGC CCGCTGGCCT TGAGCAGATG
ATGGGCAACG TCGACGGTGG CACTGAACTG CCGCCGAACC TCGGCGGAGG CCTTGGCGGA
CTGTTCGGTC GCTGA
 
Protein sequence
MTDRLSNAFK HLKSKGKLSE ADIDGTIREI RRALLDADVA LDVVRSFTGK VRERALGTEV 
SDALNPAQQV VKIVNEELTD VLGQGVDRPL NFAKNPPTII MLAGLQGAGK TTLAGKLGYW
LKDSGHTPLL VAADLQRPNA VTQLQVVGER AGVPVYAPEK GVQSDGGEAV AAPGQTSGDP
VKVARDSIEL AKQKLYDTVI IDTAGRLGVD EELMKQARDI RDAVRPNEIL FVIDAMIGQD
AVKTAKAFDE GVDFTGVVLS KLDGDARGGA ALSVASVTGK PILFASNGEG LKDFEVFHPD
RMASRILDMG DIMTLIEQAQ KQFDEEEARK AAEKISEGSF GLDDFLDQLQ QVRKLGSMKS
LLGMIPGMAQ HRKELEQFDE REIDRTEAII RSMTPAERRD PSIINGSRRA RIAYGSGVTV
SQVNALLQRF EQAAKMMKRM SNRGGMGGGI PGFGGPAMGG GKKKGKNKKK GGKSGNPMKR
EAEEKALRDK LAGKSSGSTG GSAFAKKPQN PALPAGLEQM MGNVDGGTEL PPNLGGGLGG
LFGR