| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0762 |
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| Symbol | lytR |
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| ID | 6362692 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 874847 |
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| End bp | 876316 |
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| Gene Length | 1470 bp |
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| Protein Length | 489 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 642679927 |
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| Product | transcriptional regulator |
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| Protein accession | YP_001954706 |
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| Protein GI | 189439625 |
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| COG category | [K] Transcription |
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| COG ID | [COG1316] Transcriptional regulator |
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| TIGRFAM ID | [TIGR00350] cell envelope-related function transcriptional attenuator common domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.245721 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | GTGTCATTCA GACAATCGAC AGTTTCAGGA GGGGTTATGA CGCAGGAATC AGGTGGGGCG
GATCCGCATA TCAACCCGCC AAGCTTCATT CCTGCGGGAA ATCGACGCAC CCGGCCTTCC
GGGCAGGTGC CACGCTCCTT CGCCCCCGCC CGAACCTCGC GCCAGTCAGG TCAAGCTCCA
TCGGCCCGTC CGTCCGTCAC GGGAAATGAC ATCGAAGAGC CTCAACTGAA CGCCAACGCC
ACGGCAAGCG CCAACGTCGC GGACAACGGC AGGCGGACTC CGCCCAGTTT TTCTCCGAAA
ACCGGACGCG CCACTCGCAG CACGGCTCCG GATGCCGCCG CACCGCGCAG CATTCCGCCG
TCGCGAGCGC GGATGTCTTC CGGCTCATCC CGCAACGCCG TGCGCAATCC GTCGGATATG
CCGGTTTCCC GGCCCTCATC GCCAGCAGCA AACGTGTCCA CGAAGTTCAG CCATCTTGGC
CGGCCGGCGG CGGCAACGGC GAAAACGGTA ACGGCACGCC GTCCGCGAGC CTTACGCATC
ACCCTATGCG CAATCGCGGT ACTGGTGGCG GCGTTGATTC TTTCCGTTTT CGGTGCCTGG
CAATGGGTGG ACAGCAAACT GAATCGGAGC GACTGGCTGA CCGACACCCC CAACACGCCG
GCCTCGACTT GGCTGATTCT TGGCTCCGAT GAGCGTGACG GTTCCACCGA TTACGGCGGC
GTAGACAATA TCTCTGGCTT CAGGACCGAT ACGATTCTGG TGCTGATCAA GCCCAAAAGC
GGGCCGAGTT CGTTGGTTTC CATTCCCCGC GATTCGCTCA TGAACGTCGA TAACCAGTAC
ATGAAAATCA ATGCGGTGGC GCTGATTGCG GGCAAGAAGG CTTTGGTAAG CAACGTCGAG
CAGATCACCG GCCAGAAAAT CGATCATGTG GCACAGATCA AGTTCGGCGG TCTGCAGAAC
GTGGTGAACG CCTTGGGCGG TATCGAACTG TGCTATGACG AGGATGTTCA GGATTCCTAT
TCCGGACTGA ACTGGAAGGC GGGATGCCAT ACGGCGGATG GTTCCACCGC ATTGTCCTTC
TCTCGTATGC GATATGCCGA CGCGCGAGGA GACTTCGGAC GCAACGAACG CCAGCGACAG
GTCATCTCGG CCATCGTCAA GAAGGCTTCC AGCAGTGAGA CCCTGACCAA TCCGTCCAAA
ATCGTGGCAG TGTCCAATGC CGCGATGAGC GCACTCACCG TGGACGAGAA GACCAACCCT
TACACGTTGC TCACCATGGC GTTGGCGTTC AAAAGCGCCA CCGGCTCGAA TGGCATCTCC
GGCAGCGTGT ACTGGTCCGA CCCCGATTAT TACGTTGATG GCGTTGGTTC CTCGGTGCTG
CTTGACGACG CCAAGAACAC CGAACTGTTC AATCAACTTG CCGACGGCAC GTATAAGGCC
GGCACCGTGG GCAATCTGGC GGAAGGCTGA
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| Protein sequence | MSFRQSTVSG GVMTQESGGA DPHINPPSFI PAGNRRTRPS GQVPRSFAPA RTSRQSGQAP
SARPSVTGND IEEPQLNANA TASANVADNG RRTPPSFSPK TGRATRSTAP DAAAPRSIPP
SRARMSSGSS RNAVRNPSDM PVSRPSSPAA NVSTKFSHLG RPAAATAKTV TARRPRALRI
TLCAIAVLVA ALILSVFGAW QWVDSKLNRS DWLTDTPNTP ASTWLILGSD ERDGSTDYGG
VDNISGFRTD TILVLIKPKS GPSSLVSIPR DSLMNVDNQY MKINAVALIA GKKALVSNVE
QITGQKIDHV AQIKFGGLQN VVNALGGIEL CYDEDVQDSY SGLNWKAGCH TADGSTALSF
SRMRYADARG DFGRNERQRQ VISAIVKKAS SSETLTNPSK IVAVSNAAMS ALTVDEKTNP
YTLLTMALAF KSATGSNGIS GSVYWSDPDY YVDGVGSSVL LDDAKNTELF NQLADGTYKA
GTVGNLAEG
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