Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0728 |
Symbol | melB1 |
ID | 6363267 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 833221 |
End bp | 834708 |
Gene Length | 1488 bp |
Protein Length | 495 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642679891 |
Product | Na+/xyloside symporter |
Protein accession | YP_001954672 |
Protein GI | 189439591 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2211] Na+/melibiose symporter and related transporters |
TIGRFAM ID | [TIGR00792] sugar (Glycoside-Pentoside-Hexuronide) transporter |
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Plasmid Coverage information |
Num covering plasmid clones | 5 |
Plasmid unclonability p-value | 0.0449813 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGCAACG AAAATGTCGC GGACGGTGAC GTCCGCAGGA AGGGCGGGTT AGGCCAGCGC ATCGCCTACG CGTGCGGCAA CTTGGGGCAG GCTGCCTTCT ACAACGCGAT GAGCACGTAC TTCGTCACGT ACGTCACCAG CTGCCTGTTC GTCAGCTACA GCAAGGCTCT CGCCGCCCAA ATGATCGCCG TCATCACCGG CCTGATCGTC GTTATCCGCA TCGCCGAGAT CTTCATCGAT CCGCTGCTGG GCAACCTCGT GGATAACACC ACCACCAAGT GGGGCCGTTT CCGCCCGTGG CAGTTCATCG GCGGACTGGT CTCCTCCGTG TTGATCGTGC TCATCTTCTC CGGCATGTTC GGACTGGTCA ACGTGAACAC CACGCTGTTC ATCGTGCTGT TCATCATCAC GTTCATCGTG CTTGACGTGT TCTACTCCCT GCGTGACATC TCCTACTGGG GCATGATCCC GGCGTTGTCC TCCGACTCCC ACGAACGTTC CACCTACACC GCCCTTGGCA CCTTCACCGG CTCTATCGGC TACAACGGCA TCACCGTCAT CGTCATCCCG ATCGTCAGCT ACTTCACCTG GACGTTCACC GGCGCCAAGG GCCAGGGCCA GGCCGGATGG ACCTCCTTCG GCTTCATCGT CGCGCTCCTC GGCCTGATTA CCGCCTGGAC CGTCGCCTTT GGCACCAAGG AAAGCACCAG CGCGCTGCGT GCCAAGGCCC AGAAGAACGG CAACCCGTTC GAGGCGTTCA AGGCGCTGTT CCAGAACGAC CAGCTGCTGT GGGTCGCCCT GTCCTACCTG CTGTACGCCA TCGCAAACGT CATCACGACC GGTGTGATGT ACTACCTCTT CGTGTTCGTG CTTGACGAGC CTGCCGCCTT CTCCATCACC GGCATCATCC CGCTGATCGC CGGATTCATC ATGGCGCCGC TGTACCCGAT TCTCAACCGC TGGATTCCCC GTCGCTACCT GTTCACCGGC GGCATGGTCT CCATGATCAT CGGCTACACG ATGCTCGCCC TGTTCTCCAG CAACCTGCCG GTCGTCATCG TCGCCCTGAT CTTCTTCTAT GTGCCTGCGC AGTTCATCCA GATGACCGCG ATTCTGTCGC TGACCGACTC CATCGAGTAC GGCCAGCTGA AGAACGGCAG GCGCAACGAG GCGGTCACCT TGTCGGTGCG TCCCATGCTC GACAAGATCG GCGGCGCGAT GTCCAACGGT GCGGTCGGTG CCGTTGCCCT CGCGGCTGGC ATGACCGGTC ATGCCACGGC AGCCGACATG ACCGCGTCCA ACATCGCCAC GTTCAAGACC TTCGCCTTCT ACGTCCCGCT TGTTCTCATC ATCCTCAGCC TCGTCGTGTT CTGGTTCAAG GTCAAGATCG ATGAGAAGAT GCATGCGCAG ATCGTTGAGG AGCTCGAAGC CAAGCTCGCT TCCGGCGAGA TCGTCGACGA TGAGGCGCAG GCAGTTATTA AGAACTGA
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Protein sequence | MSNENVADGD VRRKGGLGQR IAYACGNLGQ AAFYNAMSTY FVTYVTSCLF VSYSKALAAQ MIAVITGLIV VIRIAEIFID PLLGNLVDNT TTKWGRFRPW QFIGGLVSSV LIVLIFSGMF GLVNVNTTLF IVLFIITFIV LDVFYSLRDI SYWGMIPALS SDSHERSTYT ALGTFTGSIG YNGITVIVIP IVSYFTWTFT GAKGQGQAGW TSFGFIVALL GLITAWTVAF GTKESTSALR AKAQKNGNPF EAFKALFQND QLLWVALSYL LYAIANVITT GVMYYLFVFV LDEPAAFSIT GIIPLIAGFI MAPLYPILNR WIPRRYLFTG GMVSMIIGYT MLALFSSNLP VVIVALIFFY VPAQFIQMTA ILSLTDSIEY GQLKNGRRNE AVTLSVRPML DKIGGAMSNG AVGAVALAAG MTGHATAADM TASNIATFKT FAFYVPLVLI ILSLVVFWFK VKIDEKMHAQ IVEELEAKLA SGEIVDDEAQ AVIKN
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