Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0679 |
Symbol | sdhA |
ID | 6364016 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 776749 |
End bp | 778614 |
Gene Length | 1866 bp |
Protein Length | 621 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642679837 |
Product | fumarate reductase flavoprotein subunit |
Protein accession | YP_001954623 |
Protein GI | 189439542 |
COG category | [C] Energy production and conversion |
COG ID | [COG1053] Succinate dehydrogenase/fumarate reductase, flavoprotein subunit |
TIGRFAM ID | [TIGR01812] succinate dehydrogenase or fumarate reductase, flavoprotein subunitGram-negative/mitochondrial subgroup |
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Plasmid Coverage information |
Num covering plasmid clones | 8 |
Plasmid unclonability p-value | 0.918858 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGAGTCCGA AACGTTTGGA AGATATGTAT GATGCGGTGA TCGTCGGCGC CGGAGCGGCC GGCCTGTCGG CGGCGTTGGG ACTGCTGCGC TCCCCCGAGA TCACCGAGCT CAAGGAACAA GGCGTGGACC CGAAGATCCT CGTGGTCTCC AAACTGCAGC CGCTGCGTTC GCACACCGGT TCAGCCGAGG GCGGCATCGC CGCGAGCCTG GGCAATGTGG AGTCCGATGA CTGGCACTGG CATTACTACG ACACCATCAA GGGCGGCGAC TGGCTGGTGG ACCAGGATGC GGCCAAACTG CTCGCCGAAT ACGCGCCGCA GACCGTGATC AACCTGGAGC GTCAGGGCGT GGCCTTCTCC CGTACCGAGG ACGGGCATAT CGCCCAGCGC CGGTTCGGCG GCCACACGCG CGAGTTCGGC GGCGCCCCGG TCAAGCGCGC CGCCTATGCG GCCGACCGCA TCGGCCACCA GATTCTGCAC GCCTTGTGGC AGCAGTGCGT GGCCGCCGGC GTCGAGTTCG CCGAGGAATG GTATGTGACC GACCTGGTGC TCGCCGACGA CGGCAAGCAG GCGGCCGGCA TCGTGGCCTT TGACACGCAT TCGGGCAAGA TTCAGGCCAT CCACGCGCGC AACGTGCTGC TTGCCACCGG TGGCGCGGGC CGACTGTTCC ACACCACGTC AAATTCCTGG GATCTGACCG GCGACGGCAT GGGCTTGACC TTGGCCGCCG GTCTGCAGCT GGAGGACATC GAATTTGTGC AGTTCCACCC CACCGGGCTC GCGCACACCG GCATCCTGCT GTCCGAGGCG GCCCGCGCCG AGGGCGGCAT TCTGAGGAAC GCCGACGGTG AGCCGTTTAT GGAACGCTAC GCTCCGGAGC ATAAGGATCT GGCCGCACGA GACGTGGTCT CCCGCTCCAT CATGGCGGAG ATCGACGCCG GTCGCGGCGT CGCCGACCCG AAGGACCCGG ATGGTCCGAA GGACTGCGTC TGGCTGGATA TGACCGGCAT CGACCCCGAA CGTATGAAGG AAGTGCTGCC GCAGGTGGTC GAAACCATCG AGCAGTACGC GAACCTCGAT CCGGCCAAGG ACCTAGTACC CATCAAGCCC ACTGCACACT ACACGATGGG CGGCATCCCC ATCACCACCG ACGGCGAGGT GTACCGTTGG GCCGACGGTG CCGTGCAGGT AGTCGATGGA CTGTTCGCCG CTGGCGAATG CTCTTGTGTC TCCGTACATG GTGCGAATCG TCTGGGCGGC AATTCTCTGC TCGACGCCTG CCTGTTCGGC ACACGCGCTG GTCAGACGAT GGCCGCACGC ATCGCCGAGA ACCCGGTTGA CTCCCCCATG GCCGATGATT CGGCCGATGA CATGCTGACC GATGCCGCCG ATCAGGCTGC CGATTCTCGC AAAGCGGAGC TTGACGAACT GCTCGCCGGG CCAATAGATG ATTCAGACGA TGGAGTGCCC ACCGCCAATC CTTATCAGCT CATGGCCCAA CTCGGATCAG TGATGGAGCA GGCTCTGGCC GTACGTTGCA CCGCTCAGAC CATCGATACG GCGTTGACCC AGATCAACGG TGACATCACA CCGGTTGCCG ATACCTTGCG GGCCCATGAC AAGACCGCCG CTTTCAATCA GGAGGTCACC GCCATCTGGG AAGTCCGTCA TCTGATCGAA CTGGCCGAGG TCATGCTGCA CGCTTCCGAA TCCCGTCAGG AATCTCGCGG ATCCATGCAA CGCCTTGATT TCCCCGAACG CGACGATGAG CATTTCCTTG CTCACTCGAT GGTCGCCGAT GATGGTTCGG TAAGTTTCAA GCCGGTGCAC ATCACCGACT ATCCGCCCAA GAAGCGCGAG TACTGA
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Protein sequence | MSPKRLEDMY DAVIVGAGAA GLSAALGLLR SPEITELKEQ GVDPKILVVS KLQPLRSHTG SAEGGIAASL GNVESDDWHW HYYDTIKGGD WLVDQDAAKL LAEYAPQTVI NLERQGVAFS RTEDGHIAQR RFGGHTREFG GAPVKRAAYA ADRIGHQILH ALWQQCVAAG VEFAEEWYVT DLVLADDGKQ AAGIVAFDTH SGKIQAIHAR NVLLATGGAG RLFHTTSNSW DLTGDGMGLT LAAGLQLEDI EFVQFHPTGL AHTGILLSEA ARAEGGILRN ADGEPFMERY APEHKDLAAR DVVSRSIMAE IDAGRGVADP KDPDGPKDCV WLDMTGIDPE RMKEVLPQVV ETIEQYANLD PAKDLVPIKP TAHYTMGGIP ITTDGEVYRW ADGAVQVVDG LFAAGECSCV SVHGANRLGG NSLLDACLFG TRAGQTMAAR IAENPVDSPM ADDSADDMLT DAADQAADSR KAELDELLAG PIDDSDDGVP TANPYQLMAQ LGSVMEQALA VRCTAQTIDT ALTQINGDIT PVADTLRAHD KTAAFNQEVT AIWEVRHLIE LAEVMLHASE SRQESRGSMQ RLDFPERDDE HFLAHSMVAD DGSVSFKPVH ITDYPPKKRE Y
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