| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0636 |
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| Symbol | |
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| ID | 6363428 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 724143 |
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| End bp | 725621 |
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| Gene Length | 1479 bp |
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| Protein Length | 492 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679794 |
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| Product | putative transcriptional regulator |
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| Protein accession | YP_001954580 |
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| Protein GI | 189439499 |
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| COG category | [K] Transcription |
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| COG ID | [COG2865] Predicted transcriptional regulator containing an HTH domain and an uncharacterized domain shared with the mammalian protein Schlafen |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.242248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGTCGATG ACTATACTGC CAAAATGACT GAGCTGATCG AACTCATGCG TCTGATCGGC
AACGATACGC AGCAGTGCGA GGTCAAGGAA TGCAAGCGCA AGATCTCCTC GACCATCACC
GATACGCTGT CCGCGTTCTC CAATGGCTCC GGCGGCTGGA TTATCCTGGG CCTGTCCGAA
AAGAACGGGT TCACGCCGGT CGAGGGATTC GACGCGCGCG CCATGCAGGA GGCGCTGAGC
CAGGCGTGCG AGAAGATGAC GCCGGTGGTG CGGCCCGTGA TCGTCACCTG CCCGTTCGAA
GGCGCGAATC TGGTGTTCGC GCGCATCGAC GAGATGCTGC CGCGCGACAA GCCCTGCTTC
ACCACCGCGC TCGGACCGCA CGGCGGCTCG TTCATCCGTA CCGGCGACGG CGACCGGCGC
ATGACCTCCT ATGAGGTCGA CCGGCTCATC GAGGAGCATC TGCAGCCCAC ATACGATCTG
GATATCGTGC CCGACGCCAC GACCGATGAC CTCGACCCGC AGCTTGTTGC CGGACTGTTG
GCACGCGTGC GCGAACAGCA TCCGCGCGTG TTCGCCGACC GAGACGGCAT CGATGTGCTG
CTGGATCTGC AGGTGTTGCG CCATGATGAT TCCGACGAGT CGGAGGTCGG CGGAATCCTG
CGCCCCACCT TGGCCGGACT GCTGGCGTTG GGCCGCTATC CGCAGAAGTT CTATCCGCGG
CTCGGCATTT CGATTGCCGT GTTTCCGGGG ACGAGCCGGG ACGATGTGTT CCGGGGTGAC
GAACGATTGG TCGCCTCGAA GTCGGTGGTC GGTTCGATTC CGGTGATGAT CGACGATGCG
GTCGACTCGT TGATGCGTTG GATTGGCGCG AAGAAGCCCG ACTATCCGCC GCTCGTGTTG
CGCGAGGCGA TTGCGAACGC GCTCACCCAC CGTGATTATT CGCCCGATGC GCGCGGCACG
CAGGTGCATA TCAGCGTGTT CACCGATCGC ATCGAGATCA CCAATCCGGG TGGCCTGTAC
GGCATGGTGA CACATGATGT GCTGGCGAGC CCTCATCCGG TGACGGGCGC GCCGTTCGTC
TCCACCCGAA ACCAGTTCCT GTTCACGCTG CTGGAGTCCA CGCCGTATCC GGGCGGCGGG
TTTGTGAACC CGGAAGGCGG CGACGGCTAC CAGCGCATCG CCGCCGCGTT GCGCGAGGCC
GGCATCGAGC CGGCGACCAC GCGCAACGAC ATCAACACGT TCACGATGAC CATCACCAAG
CAGCGCACGA TGGCGAACAG TTCACCGGGC GACGTGGTCA AGGCGATTAT GACCGTACTG
GAGCGGCATT CGGCCATGAG CGTCAAGGAG ATCATGCGCG AACTGCAGTT GACGCCGCTG
GCCGCCACAT CCGGTATGCG CGAGCTGATG AAGGAAGGGC GGGTCGCCCG AGTCAAGTTC
GCCGACGACC CGGCACAGCG GTATCGGTTG AAAGGCTGA
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| Protein sequence | MVDDYTAKMT ELIELMRLIG NDTQQCEVKE CKRKISSTIT DTLSAFSNGS GGWIILGLSE
KNGFTPVEGF DARAMQEALS QACEKMTPVV RPVIVTCPFE GANLVFARID EMLPRDKPCF
TTALGPHGGS FIRTGDGDRR MTSYEVDRLI EEHLQPTYDL DIVPDATTDD LDPQLVAGLL
ARVREQHPRV FADRDGIDVL LDLQVLRHDD SDESEVGGIL RPTLAGLLAL GRYPQKFYPR
LGISIAVFPG TSRDDVFRGD ERLVASKSVV GSIPVMIDDA VDSLMRWIGA KKPDYPPLVL
REAIANALTH RDYSPDARGT QVHISVFTDR IEITNPGGLY GMVTHDVLAS PHPVTGAPFV
STRNQFLFTL LESTPYPGGG FVNPEGGDGY QRIAAALREA GIEPATTRND INTFTMTITK
QRTMANSSPG DVVKAIMTVL ERHSAMSVKE IMRELQLTPL AATSGMRELM KEGRVARVKF
ADDPAQRYRL KG
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