| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0627 |
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| Symbol | uvrD2 |
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| ID | 6363419 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 715005 |
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| End bp | 717707 |
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| Gene Length | 2703 bp |
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| Protein Length | 900 aa |
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| Translation table | 11 |
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| GC content | 63% |
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| IMG OID | 642679785 |
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| Product | superfamily I DNA and RNA helicase |
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| Protein accession | YP_001954571 |
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| Protein GI | 189439490 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0210] Superfamily I DNA and RNA helicases |
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| TIGRFAM ID | [TIGR01073] ATP-dependent DNA helicase PcrA |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.40075 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | GTGTACGACG AGCCGGAAGT CATCGCACGC AGCGCACAGG AACTCGTGGG CGACCTGAAC
CCGCAGCAGG CGGAAGCCGT GCAATACCGC GGTCAGGCGC TGCTGATCGG AGCCGGTGCA
GGCTCCGGCA AAACCCGCGT GCTGACCCGC CGCATCGCCT GGATCTTGAG CCAGTTCGGC
GCATGGCCGA GCCAGATTCT AGCCATCACC TTCACCAACA AGGCCGCCGC CGAAATGCGC
GAAAGACTCG GCTCGCTGAT CGGCCCGGTG GCCCAGCGCA TGTGGGTCTC CACCTTCCAC
TCCGCCTGCG TGCGCATTCT GAGGCGCGAC GGCAAGTCCA TCGGACTCAA GTCCGGCTTC
TCCATCTACG ATTCCGCCGA CTCCGAGCGA CTCGTCAAAA TCATCGCCAC CGAATTCAAC
CTCGACATCA AGCGCTACAC TCCACGCTCG ATTCTCGGCC ATATCTCCGA CCTCAAGAAC
AATCTGACCG GTTGGAAGGA AAACCTCGCC GTTCACGCGC CCGACTTCAC GCCCGGCCAG
CGCGGCTACC AGTTCGGCAC GGTGGGCGAC CTTGAAGCCA TCTACGCGGT GATCTACGCC
GAATACGAGC ATCGCTTGGC CCTGGCCAAC GCCGTCGACT TCGACGATCT GATCGGCCGC
ACGGTCGAGT TGCTGCGCAC TGACCCGGCC GTCGCCGAGT ACTACCATCA CCGCTTCCGT
TACATTCTGG TCGACGAGTA TCAGGACACC AACCACGCCC AGTACGTGCT CGTGCGCGAG
CTGGCCGGCG TGGACACGGG GGAGAAGGCC ATCCCGGGCG CGCCTAACGC CGGCAAGTCC
GGCCCCGCCT GGATCACCGT GGTGGGCGAT TCCGACCAGT CCATCTACGC GTTCCGTGGT
GCCGACATCC GCAACATTCA GGACTTCGAG CAGGACTTCC CGAACGCCAA GACCATCATG
CTCGAACAGA ACTATCGTTC GACGCAGACC ATTCTGGATG CGGCCAACGC GGTGATCAGC
AACAACGAGG GCCGCAAGCC CAAGAAACTG TGGACCGCGC TCGGCAAGGG CGAGCCGATC
GTCGGCTACG CGGCGGACAA CGCCCAGCAG GAGGCCCAGT GGGTGGCCAC CGAAATCGCG
CGCCTGCACG CCGAAGCGGG CATCGCCTAC TCCGACATGG CGATCATGTA CCGCGCCAAC
GCCCAATCCC GCTCGCTCGA AGAGGCGCTG ATCAACACGA ATCAGCCGTA TCAGCTCGTC
GGCGGCACCA AGTTCTACGA ACGTCGCGAA ATCAAGGATG CGCTGGCCTA TTTGCAGGCG
CTCGTCAATC CGGACGACGA TGTGAATCTA CGCCGTATTC TCAACGTGCC CAAGCGTGGG
CTTGGCGACC GCGCCGAAGG CGTGCTGCTC GCCTACGCGC GCGAGCATGG CACCAGCTTC
TTCTACGCAC TCATGCACTT GGATGAGATC GAGGTGCCGA CACGCACCGC CACCTCGCTA
CGAGCATTCC GCGATCTGAT GGGCGCGCTC TCGCAGTTCA CGCGCGCGCA CGACTCCAAG
CCCAGCGAGA TCGTGGCCGA AGTATTGGAG AAGTCGGGCT TAAGGGCCGA ACTCGAGAAA
TCCGTGGACC CGCAGGACGC CTCCCGTCTG GAGAACCTCT CCCAGCTGCA GTCCACTGCC
GCCGAATTCG AACAGAACAC GCCTGACGCC ACGTTGTCCG CATTCCTGGA GACCACCGCG
CTTGTGGCCG ACTCCGACCA ACTACCCGGC GAGGCGGAGG ACTCCGGCAA GGTGACGCTT
ATGACCTTGC ACACCGCCAA GGGCCTCGAA TACCCGGTGG TGTTCCTGAC CGGCATGGAA
CAGGGCACCT TCCCGCATTC GCGTTCGATG GAAGACACCA CTGAACTGCA GGAGGAACGC
CGACTCGCCT ATGTGGGCAT CACGCGCGCC AAGCAGCGAC TGTATGTCAC GCGCGCCGCC
GTCCGCTCCC AGTGGGGCCA GGCCGCCGAT ATGATGCCCA GCCAGTTCCT CGACGAGATT
CCGGATTCGC TGATTGATTG GAAACGCCGT GAAGCCGGCG TGGAGCGTAT GCGCGCCAGC
TGGGAGACCG ATGGATTCGC CGACGATTTG GGCGGCTGGG ATGATGACGA TTTCGGCGGC
GCCGCGTTTG GCGGGTCGTC GACGTTCGGC TCGCGTGGTT CGTCCGGTTC GGGTTCGTCC
TATGGGTCGC GGTCGCGGTA TGGGTCGTCG TATGGCTCGG GTTCCGGCTC TTCGTCGTAT
GGTTCCCGTT CATCGTCGTA TGGTTCCCGC TCCGGCTCGT CCTCCTATGG TTCCCGCTCC
CGTTCGGGTT CGTCCTATGG TTCTTCAGGC TCCGGTTCGA GGTCGTCCTA CGGGTCGCGT
TCCCGTTCCG GTTCTTCGTC CGGTTCATAT GGTGGCACCC GTGGCGGCAA AGTCACCACG
CGCCGTACCG CACCGAAATC CGATTCGACC GGCTCTGCCG TGCCCAGCTC GAAGCTCACC
AAGGACAATG GCCTGAATAT CGCCGACTTC GCCGTGGGCG ACATGATCAG CCACGACCAG
TACGGTCTCG GCAAGGTCAC CGACGCACAA GACAAGGGCC GCAATTCGGT AATCACCGTG
GACTTCGGCT CCGCCGGCGT CAAACGCCTC ATGCTCCGCG TAGCGCCGAT TGAGAAGTTG
TAG
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| Protein sequence | MYDEPEVIAR SAQELVGDLN PQQAEAVQYR GQALLIGAGA GSGKTRVLTR RIAWILSQFG
AWPSQILAIT FTNKAAAEMR ERLGSLIGPV AQRMWVSTFH SACVRILRRD GKSIGLKSGF
SIYDSADSER LVKIIATEFN LDIKRYTPRS ILGHISDLKN NLTGWKENLA VHAPDFTPGQ
RGYQFGTVGD LEAIYAVIYA EYEHRLALAN AVDFDDLIGR TVELLRTDPA VAEYYHHRFR
YILVDEYQDT NHAQYVLVRE LAGVDTGEKA IPGAPNAGKS GPAWITVVGD SDQSIYAFRG
ADIRNIQDFE QDFPNAKTIM LEQNYRSTQT ILDAANAVIS NNEGRKPKKL WTALGKGEPI
VGYAADNAQQ EAQWVATEIA RLHAEAGIAY SDMAIMYRAN AQSRSLEEAL INTNQPYQLV
GGTKFYERRE IKDALAYLQA LVNPDDDVNL RRILNVPKRG LGDRAEGVLL AYAREHGTSF
FYALMHLDEI EVPTRTATSL RAFRDLMGAL SQFTRAHDSK PSEIVAEVLE KSGLRAELEK
SVDPQDASRL ENLSQLQSTA AEFEQNTPDA TLSAFLETTA LVADSDQLPG EAEDSGKVTL
MTLHTAKGLE YPVVFLTGME QGTFPHSRSM EDTTELQEER RLAYVGITRA KQRLYVTRAA
VRSQWGQAAD MMPSQFLDEI PDSLIDWKRR EAGVERMRAS WETDGFADDL GGWDDDDFGG
AAFGGSSTFG SRGSSGSGSS YGSRSRYGSS YGSGSGSSSY GSRSSSYGSR SGSSSYGSRS
RSGSSYGSSG SGSRSSYGSR SRSGSSSGSY GGTRGGKVTT RRTAPKSDST GSAVPSSKLT
KDNGLNIADF AVGDMISHDQ YGLGKVTDAQ DKGRNSVITV DFGSAGVKRL MLRVAPIEKL
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