Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0577 |
Symbol | norM1 |
ID | 6362810 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 659840 |
End bp | 661204 |
Gene Length | 1365 bp |
Protein Length | 454 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642679734 |
Product | Na+-driven multidrug efflux pump |
Protein accession | YP_001954521 |
Protein GI | 189439440 |
COG category | [V] Defense mechanisms |
COG ID | [COG0534] Na+-driven multidrug efflux pump |
TIGRFAM ID | [TIGR00797] putative efflux protein, MATE family |
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Plasmid Coverage information |
Num covering plasmid clones | 3 |
Plasmid unclonability p-value | 0.00131825 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGATAACG AACTCTTCGA AAAGGCGCCG ATTCCGGAGG CGTATTTCTC GCTGGCGATG CCCGTGGTGC TCAGCATGCT GATCACCTTG GTGTACAACA TGGTCGACAC CTATTTCATC GCGCATACGG GAAACACCGA TATGGTGGCG GGCGTCTCCC TCACCGCGCC AGTGTTCACC GTGATGATCG CCCTCGGCGA CATCTTCGGC CTCGGCGGCA GTTCGGTCAT CTCGCGCTTG TTCGGCCAAC ACCGGTTCGC CGACGGCAAG CGACTCAGCG CGTTCTGCTT CTATGCCGCC ATCGCCACCG GCCTGCTGAT TCTGGTGCTG GGCCTGGCGT TCCGCGACCC GATGCTCGCG CTGCTCGGCG CCACTGACGA CACTTGGCAG TATGCCTCCG ACTTCTACAC GCTGATCATC GTCGGCTCGC CGTTCATCAT CGTGTCGATG ACGCCGTCCA ACCTGCTGCG CACCGAAGGC CACGCCGTGC AGTCCATGAT CGGTTCGGTG GCCGGCACGG CGGTCAACAT CGTGCTCAAT CCCCTGTTCA TCCACGGATT CGGCTGGGGT GCTGCGGGTT CGGCCGGTGC CACCGTGATC GCCAACATCT GCACCGACGC CTATTTCGTC TGGTTCACGC TGCGTCACAG CAGCAACCTG TCCATCGACC CGCGGACCGT CATCGACCGC GCGCGCCGGC GTCTGGCGGT CACGGCCCGG GAGGTCGGGA GCATCCTCGC CATCGGCATC CCCTCGGCGA TCACGAACCT CACGCAGAGC GTCGGCATCG TCATGATCAA CCTGTTCCTG CTCCCCTACG GTACCGACGC GGTAGCCGCG ATGGGCATCG CGCTGAAAGT CATCATGATC GCGGTGCTGG TTTTCGTGGG ATTCGCGTTC GGCGCGCAGC CGCTGATCGG CTACAACTAC GGCGCCCGCA ATATGCCTCG ACTGCGCGGC ATTCTGCGTT TTTCCTACCT GTTCCTGTCC CTGTTCGCCC TGGTGATGAC CGTGGTGCTC AGCCTGTCCG ACCGTCTACT GATGGGATTC TTCATCGAGG ACGCCACCAT CATCACGCTG GGCGCCGGCA TGCTGCGGGT TCAGCTGCTG AGCCTGGTGT GCGTAGCCGT CGTGATGGTC ACGACCTGCA CCTTCCAGTC CGCAGGCAAG GCGGTCGGCG CCTTTGTGCT GTCGATCAGC AGGCAGGGTG TGATGCTGGC GATTACCCTG TTCGTCGGCT CCCGGCTGGC CGGCTATCAG GGTGTAATCG CCGCGCAGGC CATCGCCGAT CTGCTGACCG CGATTGTGGC GGTCATCCTG TTCGTCGTGA TGTTGCCTGA GCTGCGCAGT CGGAAAGCTC GCTGA
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Protein sequence | MDNELFEKAP IPEAYFSLAM PVVLSMLITL VYNMVDTYFI AHTGNTDMVA GVSLTAPVFT VMIALGDIFG LGGSSVISRL FGQHRFADGK RLSAFCFYAA IATGLLILVL GLAFRDPMLA LLGATDDTWQ YASDFYTLII VGSPFIIVSM TPSNLLRTEG HAVQSMIGSV AGTAVNIVLN PLFIHGFGWG AAGSAGATVI ANICTDAYFV WFTLRHSSNL SIDPRTVIDR ARRRLAVTAR EVGSILAIGI PSAITNLTQS VGIVMINLFL LPYGTDAVAA MGIALKVIMI AVLVFVGFAF GAQPLIGYNY GARNMPRLRG ILRFSYLFLS LFALVMTVVL SLSDRLLMGF FIEDATIITL GAGMLRVQLL SLVCVAVVMV TTCTFQSAGK AVGAFVLSIS RQGVMLAITL FVGSRLAGYQ GVIAAQAIAD LLTAIVAVIL FVVMLPELRS RKAR
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