Gene BLD_0448 details

Gene Information

• Locus tag: BLD_0448
• Symbol: thrS
• ID: 6363372
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 535685
• End bp: 537718
• Gene Length: 2034 bp
• Protein Length: 677 aa
• Translation table: 11
• GC content: 63%
• IMG OID: 642679604
• Product: threonyl-tRNA synthetase
• Protein accession: YP_001954392
• Protein GI: 189439311
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0441] Threonyl-tRNA synthetase
• TIGRFAM ID: [TIGR00418] threonyl-tRNA synthetase

Plasmid Coverage information

• Num covering plasmid clones: 4
• Plasmid unclonability p-value: 0.145335
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

ATGGCGCAAG CTACCATCTC CATAACCGTC AACGGCGAAG CGAAGGAGGT GGAAGCAACC 
ACCACCGGCG TAGAACTGTT CGCGGAAGAC AAGAACATCA TCGCGGTCAA GATCAACGGC 
GAGAACCGTG ACCTGTACAC GCCGCTGAAC GATGGCGATA CCGTCGACCC CATCGCCCTC 
GACTCCGAAG ACGGCCTCGC AATCATGCGT CACTCGGCCA CCCACGTCAT GGCCCAGGCC 
GTGCAGGAAG TCTACCCGAA CGCCAAGCTC GGCGTCGGCC CCGTCATCAA GGACGGCTTC 
TACTACGACT TCCAGGTCGA CCAGCCCTTC ACCCCGGACG ACCTCAAGGA CATCGAGAAG 
CGCATGCAGC GCATCATCAA GTCCTCCCAG TCCTTCCGCC GCCGTTCCGT GACTGAGGAA 
GAGGCTCTGA AGGAAGAGGC CGACCAGCCC TTTAAGATCG AACTGATCGA AGACAAGGAA 
GCACACCTCG ACCCGGCCGC CGCCACCGAG ATCTCCGAAA AGGAGCTCAG CTTCTACGAC 
AACGTAGACC GTGATGGCAA TGTGGTTTGG AAGGACCTGT GCCGCGGTCC GCACCTGCCG 
AACACCCGCT ACATCAAGGC CTTCAAGATC GAGCGTTCCG CCGCCGCCTA CTGGCGTGGT 
TCCGAGAAGA ACCCGACCAT GCAGCGCATC TACGGCACCG CGTGGGCCAC CAAGGAAGAC 
CTCAAGGCCT ACCAGACCCG TCTCGAGGAG GCCGCCAAGC GCGATCACCG CAAGCTCGGC 
GCCGAGATGG ACCTGTTCTC CTTCCCGGAT GAAATTGGCC CCGGCCTGGC CGTGTTCCAC 
CCGAAGGGCG CCGCCGTGAT CAACGCGATG GAGGACTACT CCCGTGAGAT GCACCGCAAG 
CACCACTACA GCTTCGTGCA GACCCCGCAC ATCACCAAGG GCGGCCTGTA CGAGACCTCC 
GGCCACCTGC ACTGGTACAA GGACGGCATG TACCCGCCCA TGCACCTCGA CGAGGAGAAG 
GACGCGGACG GCAACATCAC CAAGCCGGGC GCCGACTACT ACCTCAAGCC GATGAACTGC 
CCGATGCACA ACCTCATCTT CAAGTCGCGC CAGCGCTCCT ACCGCGAGCT GCCGCTGCGC 
CTCTTCGAGT TCGGCACCGT GTACCGCTAC GAGAAGTCCG GCGAGGTCCA CGGCCTGACC 
CGTGTGCGCG GCCTCACCCA GGACGACTCC CACATCTACT GCACCCGCGA GCAGATGAAG 
GACGAGCTCA CCAGCCTGCT CACCTTCGTG CTGAACCTGC TCAAGGACTT TGGCCTGACC 
GACTTCTACC TCGAGCTGTC CACCAAGGAC CCGAACAAGT ACGTCGGCTC CGACGAGATC 
TGGGAGGAGG CCACCAACAC GCTCGCCGAG GTCGCCAAGG AATCCAACCT CGAGCTCGTC 
GACGATCCGT GCGGCGCCGC CTTCTACGGC CCGAAGATCT CCGTGCAGGC CCGCGACGCC 
ATCGGCCGCA CCTGGCAGGT CTCGACCATC CAGCTCGACT TCAACCTGCC GGAGCGCTTC 
CAGCTCGAGT ACATCGCGAA GGACGGCACC CACCAGCGCC CGGTGATGAT TCACCGCGCC 
CTGTTCGGCT CCATCGAACG CTTCTTCGCC GTGCTGCTCG AGCACTACGC AGGTGCCTTC 
CCGGCGTGGC TGGCCCCCGT GCAGGTGCTC GGCGTGCCGG TTGCCGACGA GTTTGCCCCG 
CATCTGGCCG GCTTCGTCAA GTCCCTTGAA GATGAGATGG TCCGTTGCGA GATCGACTAC 
TCCGACGATC GCTTCGGCAA GAAGATTCGC AACGCCTCCA AGTCCAAGGT GCCGTTCATC 
CTCATCGTCG GTGAGGAAGA CATGAACAAC AACGCGGTCA GCTTCCGCTT CCGCGACGGC 
AGCCAGCTCA ACGGTGTGCC GGTGGACACT GCTCGCGAGC AGATTCTCAC CGTCATCAAG 
AAGCGCGTCC AGGTGAACTC CGCCGACGAC TTCAACGCTG CTGTGGCTGA GTGA 

 

Protein sequence

MAQATISITV NGEAKEVEAT TTGVELFAED KNIIAVKING ENRDLYTPLN DGDTVDPIAL 
DSEDGLAIMR HSATHVMAQA VQEVYPNAKL GVGPVIKDGF YYDFQVDQPF TPDDLKDIEK 
RMQRIIKSSQ SFRRRSVTEE EALKEEADQP FKIELIEDKE AHLDPAAATE ISEKELSFYD 
NVDRDGNVVW KDLCRGPHLP NTRYIKAFKI ERSAAAYWRG SEKNPTMQRI YGTAWATKED 
LKAYQTRLEE AAKRDHRKLG AEMDLFSFPD EIGPGLAVFH PKGAAVINAM EDYSREMHRK 
HHYSFVQTPH ITKGGLYETS GHLHWYKDGM YPPMHLDEEK DADGNITKPG ADYYLKPMNC 
PMHNLIFKSR QRSYRELPLR LFEFGTVYRY EKSGEVHGLT RVRGLTQDDS HIYCTREQMK 
DELTSLLTFV LNLLKDFGLT DFYLELSTKD PNKYVGSDEI WEEATNTLAE VAKESNLELV 
DDPCGAAFYG PKISVQARDA IGRTWQVSTI QLDFNLPERF QLEYIAKDGT HQRPVMIHRA 
LFGSIERFFA VLLEHYAGAF PAWLAPVQVL GVPVADEFAP HLAGFVKSLE DEMVRCEIDY 
SDDRFGKKIR NASKSKVPFI LIVGEEDMNN NAVSFRFRDG SQLNGVPVDT AREQILTVIK 
KRVQVNSADD FNAAVAE