| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0447 |
|---|
| Symbol | |
|---|
| ID | 6364200 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bifidobacterium longum DJO10A |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_010816 |
|---|
| Strand | - |
|---|
| Start bp | 534032 |
|---|
| End bp | 534865 |
|---|
| Gene Length | 834 bp |
|---|
| Protein Length | 277 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 55% |
|---|
| IMG OID | 642679598 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_001954391 |
|---|
| Protein GI | 189439310 |
|---|
| COG category | |
|---|
| COG ID | |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 2 |
|---|
| Plasmid unclonability p-value | 0.000016468 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | decreased coverage |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGTGAAG CAGCGAAGGA CACCGGCGCA GTATTGATCG CCGCATTCGA GGGATGGAAT
GATGCCTGTC AGGCGGCGAC GAACGCGGTG CGCCATCTGG TCAAGCGATA TGAGTCCCGC
GAGATTCGTC ATATTAGATG TGATGATTTC TATGACTATC AGGTTGCCCG TCCTATGCTG
TGCCATGTTT CGGGACGCAC CAATCTTATC TGGCCGCAGA CCACGTTCTA CGACATCACG
TTGGACGCAG GCAAGCATAT CTATGCGCAG ATCGCCCCCG AACCGAACTA TCGGTGGAAG
GAATACTGTA GCCAGAGTCT GGCCATTGCC GATGAGCTGG ATATCAATCG GATCATTACG
TTAGGTTCGA TGTTCTCCGA TTGCCCGCAT ACCCGTCCGT TGCCCATCGC CGTCAGCGAC
GGAGACTGTC AATGCGAAGG AGACCGGTCG TATAACGGCC CGGTAGGCAT TCCTACCGTT
TTGGATGTGG CCGCCGCGCA GCAAGGTTTT GCTCATTCCT CGATGTGGGT GTCCATCCCC
CAATATTTGG GCAGCGACGA ATGTTCTGCC GGCACTATGC GATTGCTGGA TGCGTTGGGC
AAGCATATCG GCTTCACCTT CGATACGGCA GATCTGAAGC AGAAAGCCGA ACAGTGGAAG
GCGCAAGCCT CGATACTGGT TCGTTGTAAT GACCAGCTTC ACGATTACGT GGAGCATTTG
GAGCACGACT ACGACTTGCA GCAGAAAGCC GAGGCGGAGG CTTCCTTGGG AGCGCCCCAG
GCCGAACAAC TGGTCAAAGA AGCAGAAGCG TTTCTGCGCC AGATGGGCAA TTAG
|
|---|
| Protein sequence | MSEAAKDTGA VLIAAFEGWN DACQAATNAV RHLVKRYESR EIRHIRCDDF YDYQVARPML
CHVSGRTNLI WPQTTFYDIT LDAGKHIYAQ IAPEPNYRWK EYCSQSLAIA DELDINRIIT
LGSMFSDCPH TRPLPIAVSD GDCQCEGDRS YNGPVGIPTV LDVAAAQQGF AHSSMWVSIP
QYLGSDECSA GTMRLLDALG KHIGFTFDTA DLKQKAEQWK AQASILVRCN DQLHDYVEHL
EHDYDLQQKA EAEASLGAPQ AEQLVKEAEA FLRQMGN
|
|---|
| |