| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0135 |
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| Symbol | |
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| ID | 6363502 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 161293 |
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| End bp | 162537 |
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| Gene Length | 1245 bp |
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| Protein Length | 414 aa |
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| Translation table | 11 |
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| GC content | 62% |
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| IMG OID | 642679275 |
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| Product | tRNA-dihydrouridine synthase |
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| Protein accession | YP_001954079 |
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| Protein GI | 189438998 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0042] tRNA-dihydrouridine synthase |
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| TIGRFAM ID | [TIGR00737] putative TIM-barrel protein, nifR3 family |
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Plasmid Coverage information |
| Num covering plasmid clones | 2 |
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| Plasmid unclonability p-value | 0.000169706 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCACAAT CCGAATCCGA AACAGTGCTC ACCGAGCATC ACGAGACCGA CAACCTCGAC
CCACGTACGG ACGCGCCGGC GCGCCCCGGG ACCCCGGTGC ATATCGCCCC GGTCCAACTC
GGCAACATCA CCGTGCCGAC CCCGGTGGTG CTCTCGCCGA TGGCGGGAGT GACCAACTGG
CCCTTCCGCG TGATTTGCGA GGAATATGGT CCCGATGGAC TCTACGTGGC CGAGATGATC
ACCGCTCGAG CCCTCGTGGC GCATAACCCG AAAGCACTGC GCCTCTGTCA TTTCGCCAAA
AGCGAAAAAA TCCGTTCACT GCAGTTGTAC GGCGTGAACC CCTCCATCAC CGAACAGGCG
GCGAAAATCG TGGTCGACGG CAACATGGCC GACCATGTGG ATCTGAACTT CGGTTGCCCG
GTGCCCAAGG TCACTCGTCG AGGCGGTGGT TCGGCCTTGC CTTGGAAAAC CGACATTTTC
ACTGAGCTAT TACAGCGCGT GGTCGCCGTA TGCGAGCCGG CGGGCATCCC CGTCACCGCG
AAGATCCGCG TCGGCATCGA CCATAACCAT GAGACCTTCC TCGAAGCCGG ACACATCGCG
CAGGAGGAGG GCTGCAAGGC CGTAACCCTG CATGCCCGTA CCACCGCCGA ATACTATGGC
GGTCATTCCG ACTGGTCCCG CATCGGCGAG CTCAAGGAAC ACCTCAACAT TCCGGTATTC
GGCAATGGCG ATATCTGGGG TGCCGAGGAT GCGCTCGAAA TGGTGCGCGA GACCGGCTGC
GACGGTGTGG CCATCGGCCG CGGATGCCAG GGCCGGCCGT GGCTGTTCGC CAACATCAAA
AACGCCTTCG AGGGCAATCC CGAACGGCTC AACCCGAATC TGGGCGAGGT CTGCCGCGTG
ATTCACCGTC ATGCCGAGCT GCTTACCGAG TTTTATGAGG GCGATGAGAT GATGGCCGTC
CACGATCTGC GCAAGCACAT CGCCTGGTAT CTGAAAGGAT TCCCGGTGGG CGGCTCCACC
CGCAAGGCCT TTATGGAATG CGAGAGCCTG GCCGATGTGG ACCGCGAGAT CGGCAAGCTC
GACCCGACTA TCGAATACCC GCCACGCGTG GTCGACAAAC CGCGCGGCCG CGTGCGTTTC
GCCAAGAAGG TGCACTTGCC GTATGGCTGG TTGGAATCGC GTACCACCAC CCACGAAGAG
CGTGAGGCGC TCTTCGGTGA CGACCCAATG GACGCCAGTT ACTGA
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| Protein sequence | MAQSESETVL TEHHETDNLD PRTDAPARPG TPVHIAPVQL GNITVPTPVV LSPMAGVTNW
PFRVICEEYG PDGLYVAEMI TARALVAHNP KALRLCHFAK SEKIRSLQLY GVNPSITEQA
AKIVVDGNMA DHVDLNFGCP VPKVTRRGGG SALPWKTDIF TELLQRVVAV CEPAGIPVTA
KIRVGIDHNH ETFLEAGHIA QEEGCKAVTL HARTTAEYYG GHSDWSRIGE LKEHLNIPVF
GNGDIWGAED ALEMVRETGC DGVAIGRGCQ GRPWLFANIK NAFEGNPERL NPNLGEVCRV
IHRHAELLTE FYEGDEMMAV HDLRKHIAWY LKGFPVGGST RKAFMECESL ADVDREIGKL
DPTIEYPPRV VDKPRGRVRF AKKVHLPYGW LESRTTTHEE REALFGDDPM DASY
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