Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0102 |
Symbol | hflC1 |
ID | 6364049 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 120700 |
End bp | 121599 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 642679241 |
Product | membrane protease-like protein |
Protein accession | YP_001954046 |
Protein GI | 189438965 |
COG category | [O] Posttranslational modification, protein turnover, chaperones |
COG ID | [COG0330] Membrane protease subunits, stomatin/prohibitin homologs |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCGTAT TCTTTGCTGG TCCGCTGATT ATCATCGTGC TACTCATTGT TCTGCTGTCT GCCGCACTCT TCGTCGTGCC GCAGCAGCAG GCGTACATCA TCGAACGCTT CGGCAAGTTC CTTAAGGTCC AGTTCGCCGG CATCCACATC CGCATCCCGT TCGTGGACCG CATCGCCATG AAAACCAACA TGCGTGTCAA CCAGCTTAAC GTGCAGCTGG AAACCAAGAC TCTTGACAAC GTGTTCGTCA CCGTGGTGGC CTCCACCCAG TTCCGCGTGA ACCCGAACGA TGTGGCCACC GCCTACTACG AGCTGCGTGA CCCGGCCGGT CAGCTGCGCT CCTACATGGA GGACGCGCTG CGTTCCGCTA TCCCCGCACT GTCTTTGGAC GATGCCTTTG CTCGCAAGGA CGATGTGGCG TTCGACGTGC AGAAGACCGT GGGCGCCGAA ATGAGCCGTT TCGGCTTCAC CGTAGTCAAG ACGCTGATCA CCGCCATCGA CCCGAGCCCA CAGGTCAAGA ACGCGATGGA CTCCATCAAT GCCGCCCAGC GTGAAAAGGA AGCCACCCGT CAGCGTGCCG AGGCCCAGCG TATCCAGATC GAGACCCAAG CCGCCGCCGA TGCGGAGAAG ACTCGCTTGC AGGGTGAGGG CCAGGCCAAT TACCGCCGCG AGATCGCCAA CGGTATCGTC GACCAGATCA AGAGTCTGCA GGCTGTGGGC ATGAACATCA ACGACGTGAA CAACGTGGTG CTGTTCAACC AGTACCTCGA CGTGATGCGC TCGCTGTCCG AATCGAACAA CACCAAGACC GTGGTGCTGC CCGCCTCCAC GCCCGGCGGT TATCAGGATC TCTACGAGCA GGTCACCAAG GCCATGCTCA CCGCTTCCGA GACGAAGTAA
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Protein sequence | MAVFFAGPLI IIVLLIVLLS AALFVVPQQQ AYIIERFGKF LKVQFAGIHI RIPFVDRIAM KTNMRVNQLN VQLETKTLDN VFVTVVASTQ FRVNPNDVAT AYYELRDPAG QLRSYMEDAL RSAIPALSLD DAFARKDDVA FDVQKTVGAE MSRFGFTVVK TLITAIDPSP QVKNAMDSIN AAQREKEATR QRAEAQRIQI ETQAAADAEK TRLQGEGQAN YRREIANGIV DQIKSLQAVG MNINDVNNVV LFNQYLDVMR SLSESNNTKT VVLPASTPGG YQDLYEQVTK AMLTASETK
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