Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0086 |
Symbol | pyrF1 |
ID | 6363636 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 107958 |
End bp | 108809 |
Gene Length | 852 bp |
Protein Length | 283 aa |
Translation table | 11 |
GC content | 62% |
IMG OID | 642679225 |
Product | Orotidine-5'-phosphate decarboxylase |
Protein accession | YP_001954030 |
Protein GI | 189438949 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0284] Orotidine-5'-phosphate decarboxylase |
TIGRFAM ID | [TIGR02127] orotidine 5'-phosphate decarboxylase, subfamily 2 |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.743004 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCCAAAT ACGGGCCGCT GTGTGTGGGC ATTGACCCGC ATCGCAAGCT CCTCACCGAC TGGGGATACA ACGTCGACGC CGAAGGCGCC GAACTCTTCT CCATGCGTAT GCTGCAGGCC GCCAACGGGC GCGCCGCAGC AGTCAAATTC CAGACGCCGA TGTTCGAGCG CTACGGAGCC AAAGGTTTCG AAGCGCTCGA GCGCGTGCTC TACGCGGCAC GACAAATGGG CGTCATCACC ATCGTCGATT GCCTGCGCGG CGGCCTGTCC ACCACGATTT CCGCCATCGC AGACGCCTAT TTCAAGCCCG GTGCACCGTT GCTGGCCGAC GCCATCACGC TGCTGCCGTA CTATGGCGCG CGTTCGTTGA ACGGCCTGAT TACCGAAGCG CTGGAAAACG GACGCGGCGT GTTCATCGCC TCCCTGACCT CCAACCCGGA AGGCATGAGT CTGCAGACCG CGTTGCGCCA GAGCGGCGAT TACAAGGGAC GTACCGTGGC CTACGGCATC GCCTCCACCG CGCAGAAGCA TAACGTGGAT ATCGAAGGCA TGGGCTCGGT TGGTCTGATT ATCGGTGCCA CCATCGGCCA ATGGATGCAG GATTCCGGCG TGGACCCCTC CAAGTTCACC GGTCCGATTC TTTCCCCCGG TTACGGTTGG CAGGGTGCCG AGGCCAAGGA TCTGAAAACC GTGTTCCGCG GTACGCGCGG CAACGTGCTG GTCACCGTGT CCCGCTTTAT CGCCTCGCAT GGGCCGGATA TCGCCGCACT GAGCCAAGCC ACCGAGTCGA TTGCGCTTGA CGTACGTCAG GCGCTGATGG AAGCCACTGT CGAAGGCTCG GAAAACCAGT AA
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Protein sequence | MAKYGPLCVG IDPHRKLLTD WGYNVDAEGA ELFSMRMLQA ANGRAAAVKF QTPMFERYGA KGFEALERVL YAARQMGVIT IVDCLRGGLS TTISAIADAY FKPGAPLLAD AITLLPYYGA RSLNGLITEA LENGRGVFIA SLTSNPEGMS LQTALRQSGD YKGRTVAYGI ASTAQKHNVD IEGMGSVGLI IGATIGQWMQ DSGVDPSKFT GPILSPGYGW QGAEAKDLKT VFRGTRGNVL VTVSRFIASH GPDIAALSQA TESIALDVRQ ALMEATVEGS ENQ
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