Gene BLD_0082 details

Gene Information

• Locus tag: BLD_0082
• Symbol: efp
• ID: 6364406
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bifidobacterium longum DJO10A
• Kingdom: Bacteria
• Replicon accession: NC_010816
• Strand: +
• Start bp: 101897
• End bp: 102463
• Gene Length: 567 bp
• Protein Length: 188 aa
• Translation table: 11
• GC content: 61%
• IMG OID: 642679221
• Product: elongation factor P
• Protein accession: YP_001954026
• Protein GI: 189438945
• COG category: [J] Translation, ribosomal structure and biogenesis
• COG ID: [COG0231] Translation elongation factor P (EF-P)/translation initiation factor 5A (eIF-5A)
• TIGRFAM ID: [TIGR00038] translation elongation factor P

Plasmid Coverage information

• Num covering plasmid clones: 18
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

GTGGCACAGA CTACTAACGA CATCAAGAAC GGATCCGTCC TGAACCTCGA CGGGCAGCTG 
TGGACCGTCA TGAAGTTCCA GCACGTCAAG CCGGGCAAGG GCCCCGCCTT CGTGCGCACC 
ACCATCAAGA ACGTGCTCTC CGGCAAGATC GTCGACAAGA CCTTCAACGC GGGCATGAAG 
ATGGAATTCG AGACCGTGGA CAACCGCACT CTCCAGTACT CCTACGAGGA CGGTGACAAC 
TTCGTGTTCA TGGACATGAC CACCTACGAT CAGATCATGG TTCCGAAGAC CCTTCTGGGC 
GACAAGGCCA AGTTCCTGCT CGAAGGCACC GACTGCCTGG TCTCCTTCCA CGACGGCACC 
CCGCTGAGCG TCGATCTGCC GGGCTCCGTG GTCCTGACCA TCACCCACAC CGAGCCGGGC 
CTGCAGGGCA ACCGCTCCAA CGCCGGCACC AAGCCGGCCA CCGTTGAGAC CGGAGCCGAG 
ATTCAGGTCC CGCTGTTCAT CAATGAGGGC GACCGCGTCA AGATCAACAC CGAGGACGGT 
TCCTACACCG GCCGCGAGAA CAACTGA 

 

Protein sequence

MAQTTNDIKN GSVLNLDGQL WTVMKFQHVK PGKGPAFVRT TIKNVLSGKI VDKTFNAGMK 
MEFETVDNRT LQYSYEDGDN FVFMDMTTYD QIMVPKTLLG DKAKFLLEGT DCLVSFHDGT 
PLSVDLPGSV VLTITHTEPG LQGNRSNAGT KPATVETGAE IQVPLFINEG DRVKINTEDG 
SYTGRENN