Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0055 |
Symbol | |
ID | 6363756 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | - |
Start bp | 66445 |
End bp | 68877 |
Gene Length | 2433 bp |
Protein Length | 810 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 642679194 |
Product | ATPase of ABC-type transport systems |
Protein accession | YP_001953999 |
Protein GI | 189438918 |
COG category | [R] General function prediction only |
COG ID | [COG1123] ATPase components of various ABC-type transport systems, contain duplicated ATPase |
TIGRFAM ID | [TIGR01166] cobalt transport protein ATP-binding subunit |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 2 |
Plasmid unclonability p-value | 0.165072 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
| |
Sequence |
Gene sequence | ATGACCGTTG CACCCCATTC CTTCGACGCC GACGAGTTCC ACGATTCTGC CGAACCTCAC GCTTCCGCCG AGCCTGCCTC CCCCGCCGCC GTGCTCAAGG ACATTCGTTT CAGCTATGAC CGCGGCACCT CATGGGCTTT GGATGGCGTT TCACTCACGG TCCATGCCGG CGAGCGCCTA TGCTTGGTCG GTCCGAACGG GTCGGGCAAA TCCACGTTGG CCCGTCTGAT TGCGGGATTG ACCGCGCCGG ACGGTGGTGA AGTGACGTTA CTGGGGCAAC GCGTGTACGC AGCCGGCCCG AATGCCGATG CCTATCGTGC TGCCCGCCAC GGCATCGGTA TGGTGTTCCA GAATCCCGAG GATCAGCTGG TCACTACCGT GTTGGAGGAT GACGTGGCCT TTGGCCCGGA GAATCTCGGG CTGGAGCGCG AGCTCATCGG CGAGCGTATC GTTGATTCAT TGCAGGCCGT GGGGTTGGCG AACTTACGCC AGTCCGACCC GACCCGTATG AGCGGCGGGC AGCAGCAACG CGCCTCCATC GCCGGCATGC TGGCCATGAA CCCGGCAATG CTGGTATTGG ATGAGCCGAC CGCCATGCTG GACGAATCCG CACGCGCCGA AGTTATGCGC ATTTTGGATG ATTTGCAGGC GCGCGGCACC ACTATTGTGC ATGTCACGCA TCATCCAGAT GAAACCGTTC ATGCCGATCG CATCGTGCAC ATGGAGGCCG GGCGAATCAT TGGTATCACT GCAGCCGTCG ATAATCGATC CCCGCTAGCG GAGGCTGTCT CGCAAAGCGA GACTGAGGGT AGTATCGGCA CAGAAGCCGC CCCCAGTCGC CCTACGAACG ACAGCCCCCG CCAGCGGGAG CGCGAAGACG GCTCCGAACT GCCGCTGCTC TCCGATGGCA TCGGTGATAT GACGAACCCC ATTATTCGCG TCTCGCATCT GACCTATCGC TATCCTTCGG CCAAACGGGC GGTTATCGAT GACCTGTCGT TCACCATCGC GCGCGGTGAA ACCGTGGCAC TGATGGGCGT GAATGGTTCG GGCAAGTCGA CGCTGGTGCG CATGTTGTGC GCACTGACTG CGCCGACCGC CGGCAGCATC GAAGTGGCCG GTGTTCCGGT GGCCTCGACC GGCAAGCGCG GTCGCAACGT GCGCCCGAAG TCGGCGAATC GCAAGCAATT AGCGCAATTG CGCCGGCATG TGGGTTACGT GATGCAGCAT CCAGAGCATC AGCTGTTCGC TGACACGGTA GCCGAGGACG TGGCGTACGG CCCACGCAAC CAAGGGCTTG GCGAGACCGA GGTAGCCGAC CGCGTGCGCG AATCACTGGA ACTGCTGCAT ATCGGGCATC TTGCCGACCG CTCCCCCTTC GACCTGTCCG GCGGGCAACA ACGATTGGCA GCCATTGCCG GCGTGCTGGC TTGCAATCCT GACGTGCTCA TCATGGACGA GCCGACCGCG AGTCTGGACG CCCAAGCCAA GAAGCGTATC CATGAGCTGT TGCGCACGCT CAAATCGCGT GGCGTGACCG TGCTCATCAT CACCCATGAC CGGGAGGAGG CCGAGCAAAT CGCCGACCGC GTGGTCCGTA TGCCGATTGC CGCCCCCGCA TCCGGCGGCC CCGTCACGGC CACCGTCACC GAGCCGGCCG TATCCTCCAA CGGCCCTGCG CACTCAGTGA TACACCGACT TGACCCGCGC GTGAAGATGG TGGGCTTCCT GGCCGCCATG TTCACGATGT TCGCGGTGAA CACGCCAACC CAGCTCGCGC TGGGCATCGC CATCACCCTG GCCGTTATCG CGGCGGCACG CCTGAACCCG TTACGGGTGC TTGAATCCAT TCATCCGATT CTGATCCTGC TGGTGCTGAT GGGCGTGGTC AATCTGTTTG TGGTACGCAC CGGCACGCCG GTGGTGGCGC TTGGCCCGCT AAGCATCACC GATCAGGGCG TGACCATAGC CGTGCTGTAC GCCTGCCGTT TCGCATTGGT AATCATTCTG GGCGCGGTGT TCCTCACTAC CACCACGCCT ACCGCCATGA CCGACGCCTT CGCCACCTTG ATCAGTCCGC TCAACCGGCT CGGTATCCAT GCCCAAGAAA TCGCGCTGGT CATGAGTCTG GCATTGCGAT TCATTCCAAC GCTGACCGAC GAAACCCGCG CCATCGTCGA CGCCCAATCC GCGCGTGGCG GTTCCATCGA AACCGGTTCA CTGGCCCAGC GCATCAAGGC GATGAGCGCG ATTATCGTGC CGATTTTCGC CGGCACGTTG CGTCACGCGG ACAACCTGAG CCTCGCACTT GACGCCCGCT GCTACGAGGA GGGCATCCGC CGCACCCACT GGCGTGCCCT GACCATCGCC GCGCGAGATC TCATATTCGC CGCTGCCGTC ATCATCTACA TCGCGGCCAT CATCGCGCTG TAG
|
Protein sequence | MTVAPHSFDA DEFHDSAEPH ASAEPASPAA VLKDIRFSYD RGTSWALDGV SLTVHAGERL CLVGPNGSGK STLARLIAGL TAPDGGEVTL LGQRVYAAGP NADAYRAARH GIGMVFQNPE DQLVTTVLED DVAFGPENLG LERELIGERI VDSLQAVGLA NLRQSDPTRM SGGQQQRASI AGMLAMNPAM LVLDEPTAML DESARAEVMR ILDDLQARGT TIVHVTHHPD ETVHADRIVH MEAGRIIGIT AAVDNRSPLA EAVSQSETEG SIGTEAAPSR PTNDSPRQRE REDGSELPLL SDGIGDMTNP IIRVSHLTYR YPSAKRAVID DLSFTIARGE TVALMGVNGS GKSTLVRMLC ALTAPTAGSI EVAGVPVAST GKRGRNVRPK SANRKQLAQL RRHVGYVMQH PEHQLFADTV AEDVAYGPRN QGLGETEVAD RVRESLELLH IGHLADRSPF DLSGGQQRLA AIAGVLACNP DVLIMDEPTA SLDAQAKKRI HELLRTLKSR GVTVLIITHD REEAEQIADR VVRMPIAAPA SGGPVTATVT EPAVSSNGPA HSVIHRLDPR VKMVGFLAAM FTMFAVNTPT QLALGIAITL AVIAAARLNP LRVLESIHPI LILLVLMGVV NLFVVRTGTP VVALGPLSIT DQGVTIAVLY ACRFALVIIL GAVFLTTTTP TAMTDAFATL ISPLNRLGIH AQEIALVMSL ALRFIPTLTD ETRAIVDAQS ARGGSIETGS LAQRIKAMSA IIVPIFAGTL RHADNLSLAL DARCYEEGIR RTHWRALTIA ARDLIFAAAV IIYIAAIIAL
|
| |