| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0049 |
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| Symbol | araJ1 |
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| ID | 6363770 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | - |
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| Start bp | 61150 |
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| End bp | 62607 |
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| Gene Length | 1458 bp |
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| Protein Length | 485 aa |
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| Translation table | 11 |
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| GC content | 58% |
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| IMG OID | 642679188 |
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| Product | sugar efflux permease |
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| Protein accession | YP_001953993 |
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| Protein GI | 189438912 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG2814] Arabinose efflux permease |
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| TIGRFAM ID | [TIGR00711] drug resistance transporter, EmrB/QacA subfamily |
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Plasmid Coverage information |
| Num covering plasmid clones | 8 |
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| Plasmid unclonability p-value | 0.242248 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGCCTGAGC AGCATATTGA TAACGAGAAG ATTCCCACAC GTCTTATCGG CGCGATTGTG
GCTGTCGGCT CACTTGCCTT CATTGGCATT CTGACCGAAA CCGTGATGAC CGTGCTTTTC
CCCGCACTGA TGCGCGAATT CCATGTCGAC ACGGCCACTG TGCAATGGAT TACCACGATT
TATCTGTTGG CGGTGGCCGC TACCATGCCC ATCAGCTCGT TTTTGAAGCG CCGATTCGCG
CTGAAAACCA TTTTTCTTGC GGCTGTGATT CTGGCCATCG TTGGCTCGCT GATCATGATC
GTCGCCCAAG CCTTCCCGCT GCTGATTGTC GCCCGCATTA TTCAGGGCAT TGGCTCAGGC
GTGGCCACGC CGTTGATGAT CAACATCATC CTGGAGCAGT CTCCTCGTTC GAAAATCGGC
CGATTGATGG GCGTAGGATC GCTGGTCATT ACCGTGGCTC CGGCCATCGG CCCGACCGTC
GGCGGCGCGG TGACCACAGT GCTGCCGTGG CGCGCGATTT TCGTCATCGC CATTCCGCTG
GTGCTAATCG CAGCATGCAT CGGCATGAAG TGCATTGAGC AGAAGACACC GACCGAGGCT
GCCTATCTTG ACCCGATTCA GCTTGGGTCC ATTGTTGTCG CGTTGGTCGG TCTGGTGCTG
GCGCTCAACC AAGGTGGCGT GGCCATCAGT GCGGCGGTGT CCGGCAAGTC AGCCACACGC
TCCGGCATTA TCGCCATTGT CAGTCTGATT GCGGGCCTCG CCTTGTTGAT CGTGTTCGCC
ATGAGTTCCA AGCGTGCCTT CTCCCCGCTG CTGCGCCTTG GCATTCTCAA GGATCCCGCC
GTACTGTTAC ACGCCTGCGC ATATCTGCTG CTGCCATTGG TCGCCATCGG CTACGGCTAT
GTCATCACCA ATGTGGCACA GCTCTCGCTC GGTACCACGG CATTTGTGGC CGGCTCTCTG
GTACTGCCCG GAGCACTGGT CGGCGCTGTC TGTGCCCCGC TTGGCGGCTG GTTCTACGAT
AAGTTCGGCG CGGTCAAGCC GATTCTGATT CCGATCGGCA TCGCTATTTT GGGCCCAGTG
CTTATGCTGG TGTTCTCGAT GCAGCTTACG CCCTTGCTGC TCGCCGGATT CTATTTCATT
TTCGGTCTGT TCTATTCCAT CGGCAATGCG AATGTGATGA CCAGTGGCCT GTCGGAGGTC
TCTCCCGAGT TCAAGCCGGA CGGCAACGCC ATTTTCAACA CGTGTCTTCA GTTTGGCGGC
GCTGCCGGTA CCGCACTGTT CTCCACGATT CTTTCCGTGG CTCAGGCCGG CGCAGGAGAA
GAAGGCACCG CTGAGTTTGC TCACGCCACT GCCGTCGGCG GCACATGGAC GTTTGCCACG
ATGACGGTTA TCTGCCTGAT TGGCTGGTGC TGTCTGGCCA CCGCGTTCCG CATTCGCGCG
GCACGTAAGC GTGCATAA
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| Protein sequence | MPEQHIDNEK IPTRLIGAIV AVGSLAFIGI LTETVMTVLF PALMREFHVD TATVQWITTI
YLLAVAATMP ISSFLKRRFA LKTIFLAAVI LAIVGSLIMI VAQAFPLLIV ARIIQGIGSG
VATPLMINII LEQSPRSKIG RLMGVGSLVI TVAPAIGPTV GGAVTTVLPW RAIFVIAIPL
VLIAACIGMK CIEQKTPTEA AYLDPIQLGS IVVALVGLVL ALNQGGVAIS AAVSGKSATR
SGIIAIVSLI AGLALLIVFA MSSKRAFSPL LRLGILKDPA VLLHACAYLL LPLVAIGYGY
VITNVAQLSL GTTAFVAGSL VLPGALVGAV CAPLGGWFYD KFGAVKPILI PIGIAILGPV
LMLVFSMQLT PLLLAGFYFI FGLFYSIGNA NVMTSGLSEV SPEFKPDGNA IFNTCLQFGG
AAGTALFSTI LSVAQAGAGE EGTAEFAHAT AVGGTWTFAT MTVICLIGWC CLATAFRIRA
ARKRA
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