| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BLD_0048 |
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| Symbol | araH2 |
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| ID | 6363769 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Bifidobacterium longum DJO10A |
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| Kingdom | Bacteria |
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| Replicon accession | NC_010816 |
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| Strand | + |
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| Start bp | 59905 |
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| End bp | 60927 |
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| Gene Length | 1023 bp |
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| Protein Length | 340 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 642679187 |
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| Product | ribose/xylose/arabinose/galactoside ABC transporter permease |
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| Protein accession | YP_001953992 |
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| Protein GI | 189438911 |
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| COG category | [G] Carbohydrate transport and metabolism |
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| COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 3 |
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| Plasmid unclonability p-value | 0.000309961 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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| |
Sequence |
| Gene sequence | ATGACAACAG CTACGGCAAA CAAAGTGAAG GCTCCCAAGA AGGGCTTCAA GCTCGATCGT
CAGATGATCC CGACCCTCGC GGCCGTGGTG ATCTTCATCC TGATGATCAT CATGGGTCAG
GCGTTGTTCG GCACCTACAT TCGACTGGGC TTCATCTCCT CCCTGTTCAT TGACCACGCC
TACCTGATTA TTCTGGCTGT GGCCATGACC CTGCCGATTC TGACCGGTGG TATCGATTTG
TCTGTCGGTG CTATCGTGGC CATCACCGCA GTCGTCGGCC TGAAGCTGGC GAACGCCGGC
GTGCCCGCCT TCCTGGTCAT GATCATCATG CTGCTCATCG GCGCTGTGTT CGGCCTGCTG
GCCGGCACCT TGATCGAGGA ATTCAACATG CAGCCGTTCA TCGCGACCCT GTCGACGATG
TTCCTGGCCC GTGGTCTTGC CTCCATCATC TCCACCGACT CGCTGACCTT CCCGCAGGGC
AATGACTTCT CGTTCATCTC CAACGTGATC AAGATCATCG ACAATCCGAA GATCTCCAAC
GATCTGTCCT TCAACGTCGG CGTGATCATC GCACTGGTGG TTGTGGTCTT CGGCTACGTC
TTCCTGCACC ATACCCGCAC CGGACGCACC ATCTACGCCA TCGGCGGCTC CCGTTCCTCC
GCGGAACTCA TGGGTCTGCC GGTCAAGCGC ACGCAGTACA TCATCTACTT GACCTCTGCG
ACTCTCGCCG CCCTGGCCTC GATCGTGTAC ACCGCAAACA TCGGCTCTGC CAAGAACACC
GTGGGTGTTG GCTGGGAGCT CGACGCCGTT GCCTCCGTGG TCATCGGCGG TACGATCATC
ACCGGTGGCT TCGGCTACGT GCTCGGCTCC GTGCTCGGCT CTCTGGTCCG CTCCATCCTC
GATCCGCTCA CCTCTGACTT CGGTGTGCCG GCCGAATGGA CCACCATCGT TATCGGTCTC
ATGATCCTCG TCTTCGTTGT GCTTCAGCGC GCGGTGATGG CGGTCGGCGG AGATAAAAAA
TAG
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| Protein sequence | MTTATANKVK APKKGFKLDR QMIPTLAAVV IFILMIIMGQ ALFGTYIRLG FISSLFIDHA
YLIILAVAMT LPILTGGIDL SVGAIVAITA VVGLKLANAG VPAFLVMIIM LLIGAVFGLL
AGTLIEEFNM QPFIATLSTM FLARGLASII STDSLTFPQG NDFSFISNVI KIIDNPKISN
DLSFNVGVII ALVVVVFGYV FLHHTRTGRT IYAIGGSRSS AELMGLPVKR TQYIIYLTSA
TLAALASIVY TANIGSAKNT VGVGWELDAV ASVVIGGTII TGGFGYVLGS VLGSLVRSIL
DPLTSDFGVP AEWTTIVIGL MILVFVVLQR AVMAVGGDKK
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