Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | BLD_0047 |
Symbol | araH1 |
ID | 6363768 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Bifidobacterium longum DJO10A |
Kingdom | Bacteria |
Replicon accession | NC_010816 |
Strand | + |
Start bp | 58838 |
End bp | 59908 |
Gene Length | 1071 bp |
Protein Length | 356 aa |
Translation table | 11 |
GC content | 57% |
IMG OID | 642679186 |
Product | ribose/xylose/arabinose/galactoside ABC transporter permease |
Protein accession | YP_001953991 |
Protein GI | 189438910 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG1172] Ribose/xylose/arabinose/galactoside ABC-type transport systems, permease components |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 1 |
Plasmid unclonability p-value | 0.00000657164 |
Plasmid hitchhiking | No |
Plasmid clonability | decreased coverage |
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Fosmid Coverage information |
Num covering fosmid clones | n/a |
Fosmid unclonability p-value | n/a |
Fosmid Hitchhiker | n/a |
Fosmid clonability | n/a |
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Sequence |
Gene sequence | ATGGCTGAAA AGGCAAAAGA CGAGGGCAAC AACTTTGTCA AGAAGCTGCT GAGCAGCAAC CTGACCTGGT CGATCGTCGC ATTCATTCTT CTGGTCATCA TCTGCACCAT CTTCCAGCAT GACTTCCTGG CTTTGAGCTG GAACAGCAAC ACCGGTGGTC TGGCCGGCCC GCTGATCACC ATGCTCCAGG AATCTGCCCG ATACCTGATG ATTGCAACCG GTATGACCTT GGTTATCTCC ACCGCCGGTA TCGACCTTTC GGTCGGTTCC GTTATGGCAG TGGCAGGTGC CGCCGCCATG CAGACCCTGT CCAATGGCAT GAACGTGTGG CTCTCCATCC TCATCGCCTT GGCTGTTGGT CTGGCCATTG GCTGCGTCAA CGGCGCTCTG GTTTCCTTCC TGGGCCTACA GCCGTTCATC ACCACCCTGA TTATGATGCT CGCCGGCCGT GGTATGGCCA AGGTCATCAC CTCCGGTGAG AACACCGACG CCTCCGCAGT TGCTGGCAAC GAACCGCTGA AGTGGTTCGC CAACGGCTTC ATTCTGGGCA TTCCCGCCAA CTTCGTCATC GCCGTTATCA TTGTGATTCT CGTTGGCCTG CTGTGCCGCA AGACCGCTAT GGGCATGATG ATTGAGGCCG TGGGCATCAA CCAGGAAGCC TCCCGTATGA CCGGTATCAA GCCGAAGAAG ATCCTCTTCC TCGTCTACGC GATTTCCGGC TTCCTCGCGG CCATCGCTGG TCTGTTCGCC ACCGCATCCG TGATGCGTGT CGACGTGGTT AAGACCGGTC AGGACCTCGA AATGTACGCC ATTCTGGCAG TCGTCATCGG CGGTACTTCA CTGCTGGGTG GTAAGTTCTC CCTCGCCGGC TCTGCTGTCG GTGCTGTAAT TATCGCCATG ATCCGCAAGA CCATCATCAC CCTGGGCGTC AACGCCGAGG CAACTCCGGC CTTCTTCGCC GTCGTTGTGA TTGTGATCTG CGTGATGCAG GCTCCGAAGA TTCACAACCT GAGCGCGAAT ATGAAACGCA AGCGCGCGCT CAAGGCTCAA GCTAAGGCGG TGGCAGCATG A
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Protein sequence | MAEKAKDEGN NFVKKLLSSN LTWSIVAFIL LVIICTIFQH DFLALSWNSN TGGLAGPLIT MLQESARYLM IATGMTLVIS TAGIDLSVGS VMAVAGAAAM QTLSNGMNVW LSILIALAVG LAIGCVNGAL VSFLGLQPFI TTLIMMLAGR GMAKVITSGE NTDASAVAGN EPLKWFANGF ILGIPANFVI AVIIVILVGL LCRKTAMGMM IEAVGINQEA SRMTGIKPKK ILFLVYAISG FLAAIAGLFA TASVMRVDVV KTGQDLEMYA ILAVVIGGTS LLGGKFSLAG SAVGAVIIAM IRKTIITLGV NAEATPAFFA VVVIVICVMQ APKIHNLSAN MKRKRALKAQ AKAVAA
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