Gene BLD_0043 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagBLD_0043 
SymbolbaeS2 
ID6363764 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameBifidobacterium longum DJO10A 
KingdomBacteria 
Replicon accessionNC_010816 
Strand
Start bp52431 
End bp54128 
Gene Length1698 bp 
Protein Length565 aa 
Translation table11 
GC content57% 
IMG OID642679182 
Productsignal transduction histidine kinase 
Protein accessionYP_001953987 
Protein GI189438906 
COG category[T] Signal transduction mechanisms 
COG ID[COG0642] Signal transduction histidine kinase 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0980006 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clonesn/a 
Fosmid unclonability p-valuen/a 
Fosmid Hitchhikern/a 
Fosmid clonabilityn/a 
 

Sequence

Gene sequence
ATGAACCTGC GCCCTCGATT CAGCCTCAAA CGCTTGCTGC GCCACGGACG CGCTGAAGTT 
CGTCGCTCAC TGCAGGCCCG CACCGTGGCC CTCACCGTGA TTCTTACGCT GGCCGTGGCC
ATCGTCTTCT CTGGCGTATC GATGGTATCA GTGCGCGCCT CGCTGCTTAC CCAAATCACT
TCGCAGTCGC GTGCCGACTA TTCAAACATG GTGCAGCAGG CCCAAACCAG TCTGGACGCG
GCCGATGTCT CCACCGCAGT GCAGCTCCAA CAGCTGGTCA ATGACTTGGC GTCCTCGTTG
CAATCCGAGG GGTCCTCCAA CCTGATAGGT GTGTATTTGT GGAGTCGTGA TACCAACTCG
CGTGCCATCA TCCCCGTATC CACCGAACCC AGCTATCAAA GTCTGATTTC TGACGACATC
CGTTCATCCG TGGCTTCCGA CTTGGATGAC AGCGTGTTCT ATCAGCCGGT CGAAATTCCC
GGTGATTCCG GCATGCCGGG CAGCGGGACG CCCGCAGCGG TGCTCGGCAC CGTATTGGAC
TTTGGCGTGG CCGGCAACCT CGAATTCTTC GCCATTTATT CGTACACGTT CCAGCAGCAG
TCCTTGACGC AGATTCAGCT CAGTCTGGTG GTCATCTGTG CGTTGCTGTC CATCGTGGTG
GGCGTAGTAA TCTGGCTGGT GATTCGTGGC ATCGTGCGCC CGATTGAACG AGTGGCAGCG
GCCTCGGAAA CACTGGCCTC CGGCAATCTC GATATGCGCG TTACCGTGGA TCGTAAGGAT
GAGCTTGGTG TGCTGCAGCA ATCCTTCAAT ACGATGGCTG ATGCGCTCAA CCAGAAGATC
GATGAGCTGG AGGAAGCAAG CGTTTTCCAG AAACGATTTG TGTCCGACGT CAGTCATGAA
TTGCGTACCC CGGTGACCAC CATGCGTATG GCTTCCGACC TGCTCGAAAT GAAAAAAGAC
GGCTTCGACC CCTCCACCAA GCGTACGGTC GAACTGTTGG CCGGCCAGAT CAGTCGATTC
CAAGACATGC TCGCCGATCT GTTGGAAATC TCCCGCTACG ATGCCGGTTA TGCGGCACTC
GACCTTGTGG AAACCGATTT ATGCGAACCA ATTGAAACGG CAGTGGACCA AGTTGACGGC
ATCGCCCAAG CCAAACGGGT GCCGATTCAC ACGTATCTGC CCAATGTGCA GGTTTTGACT
CGTATCGATT CGCGTCGAGT GATTCGCATC GTCAGAAATC TGTTGGCCAA TGCCGTCGAT
TTCGCTGAGG ACCGGCCGAT CGAAGTGCGC GTCGCGGCCA ACCGCAAAGC CGTGGCCATC
AGCGTTCGCG ACTATGGCGT TGGTATCGAC GAAGACAAAG TCGCTCATGT ATTCGATCGA
TTCTGGAGAG GCGACCTTTC ACGTTCACGC GTTACCGGCG GCACCGGATT GGGCCTGTCC
ATCGCCATGA CTGATGCCTT GCTGCACCAC GGTAGTATCC GTGTACGTTC GGCAGTGGGG
GAGGGCACCT GGTTCTTGGT ATTGCTGCCG CGTGACCCCG ACCAAGGTGA GGTGGCGGAC
GCTGAACTGC CGGTGAATTT TGCTTCTGAA ACGCCGGATG ACCTGCGTGT TACCGGTGGG
TTTGGTGTGG CCACCAGCCA AGTCACACAT GATTATCATG AGGTTCGCCG CGACACGATG
ATGGGGAGGC CACTATGA
 
Protein sequence
MNLRPRFSLK RLLRHGRAEV RRSLQARTVA LTVILTLAVA IVFSGVSMVS VRASLLTQIT 
SQSRADYSNM VQQAQTSLDA ADVSTAVQLQ QLVNDLASSL QSEGSSNLIG VYLWSRDTNS
RAIIPVSTEP SYQSLISDDI RSSVASDLDD SVFYQPVEIP GDSGMPGSGT PAAVLGTVLD
FGVAGNLEFF AIYSYTFQQQ SLTQIQLSLV VICALLSIVV GVVIWLVIRG IVRPIERVAA
ASETLASGNL DMRVTVDRKD ELGVLQQSFN TMADALNQKI DELEEASVFQ KRFVSDVSHE
LRTPVTTMRM ASDLLEMKKD GFDPSTKRTV ELLAGQISRF QDMLADLLEI SRYDAGYAAL
DLVETDLCEP IETAVDQVDG IAQAKRVPIH TYLPNVQVLT RIDSRRVIRI VRNLLANAVD
FAEDRPIEVR VAANRKAVAI SVRDYGVGID EDKVAHVFDR FWRGDLSRSR VTGGTGLGLS
IAMTDALLHH GSIRVRSAVG EGTWFLVLLP RDPDQGEVAD AELPVNFASE TPDDLRVTGG
FGVATSQVTH DYHEVRRDTM MGRPL