| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | BCZK4667 |
|---|
| Symbol | dapF |
|---|
| ID | 3026423 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Bacillus cereus E33L |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_006274 |
|---|
| Strand | - |
|---|
| Start bp | 4773128 |
|---|
| End bp | 4773994 |
|---|
| Gene Length | 867 bp |
|---|
| Protein Length | 288 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 40% |
|---|
| IMG OID | 637548902 |
|---|
| Product | diaminopimelate epimerase |
|---|
| Protein accession | YP_086240 |
|---|
| Protein GI | 52140590 |
|---|
| COG category | [E] Amino acid transport and metabolism |
|---|
| COG ID | [COG0253] Diaminopimelate epimerase |
|---|
| TIGRFAM ID | [TIGR00652] diaminopimelate epimerase |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 39 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | n/a |
|---|
| Fosmid unclonability p-value | n/a |
|---|
| Fosmid Hitchhiker | n/a |
|---|
| Fosmid clonability | n/a |
|---|
| |
Sequence |
| Gene sequence | ATGAGCCAAT TTTCTTTTAC AAAAATGCAT GGTCTTGGCA ATAGTTATAT ATATGTAAAT
ATGTTTGAAG AACAAATTCC TGAAGAAGAT TTAGCTCTTG TCGCTGAAAA GGTTTCAAAT
ATTAATACTG GTATTGGAGC CGATGGAATG ATTTTAATTT GTCCATCTGA CGTAGCACCG
GTGAAAATGC GCATGTTTAA TAATGATGGG TCAGAAGGAA AGAGCTGCGG TAACGGTTTG
CGCTGCGTAG CGAAATATGC ATATGAGCAT AAACTAGTAG AAGATACAGT TTTCACAATT
GAAACGTTAG CTGGCATTGT AACGGCGGAA GTAACGGTAG AAGAAGGGAA AGTTACGTTA
GCGAAAATCG ATATGGGAGC ACCTCGTTTA ACACGTGCAG AAATACCGAT GCTTGGTGAA
GGTGAAACAC CATTTATTCG TGAAAACTTC TTATACAATA ATCATCGTTA TGCATTTACA
GCTGTTTCAA TGGGGAATCC GCATGCAGTT ATTTTTGTGG ATGATGTAGA ACAAGCACCT
CTTACAACAC TTGGACCAGT TCTTGAGACA CATGAAATGT TCCCAGAACG AGTAAATGTT
GAATTTATCG AGATTTTGAA TGAAGAAGAG ATGAACTTCC GCGTTTGGGA ACGTGGATCT
GGCGTAACAC AAGCTTGCGG AACAGGGGCG TGTGCTGCAG TTGTTGCCTC TATTTTAAAT
GGGAAGATGG AACGTGGTAA GGAAATTACA GTTCATTTAG CTGGCGGCGA TTTAATGATT
GCATGGACAG AAGAAGGCAA CGTGTTAATG AAAGGACCAG CAGAAGTAAT TTGCCGCGGA
GTGTATGAGT ACAAGATAGA AGCGTAA
|
|---|
| Protein sequence | MSQFSFTKMH GLGNSYIYVN MFEEQIPEED LALVAEKVSN INTGIGADGM ILICPSDVAP
VKMRMFNNDG SEGKSCGNGL RCVAKYAYEH KLVEDTVFTI ETLAGIVTAE VTVEEGKVTL
AKIDMGAPRL TRAEIPMLGE GETPFIRENF LYNNHRYAFT AVSMGNPHAV IFVDDVEQAP
LTTLGPVLET HEMFPERVNV EFIEILNEEE MNFRVWERGS GVTQACGTGA CAAVVASILN
GKMERGKEIT VHLAGGDLMI AWTEEGNVLM KGPAEVICRG VYEYKIEA
|
|---|
| |