Gene BCZK3265 details

Gene Information

• Locus tag: BCZK3265
• Symbol: sqhC
• ID: 3027142
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Bacillus cereus E33L
• Kingdom: Bacteria
• Replicon accession: NC_006274
• Strand: -
• Start bp: 3393211
• End bp: 3395064
• Gene Length: 1854 bp
• Protein Length: 617 aa
• Translation table: 11
• GC content: 38%
• IMG OID: 637547485
• Product: squalene-hopene cyclase
• Protein accession: YP_084851
• Protein GI: 52141979
• COG category: [I] Lipid transport and metabolism
• COG ID: [COG1657] Squalene cyclase
• TIGRFAM ID: [TIGR01507] squalene-hopene cyclase; [TIGR01787] squalene/oxidosqualene cyclases

Plasmid Coverage information

• Num covering plasmid clones: 22
• Plasmid unclonability p-value: 1
• Plasmid hitchhiking: No
• Plasmid clonability: normal

Fosmid Coverage information

• Num covering fosmid clones: n/a
• Fosmid unclonability p-value: n/a
• Fosmid Hitchhiker: n/a
• Fosmid clonability: n/a

Sequence

Gene sequence

TTGTTATTAT ACGAAAAAGT GCATGAAGAA ATAGTGAGAA GAGCAACTGC ACTTCAAACG 
ATGCAATGGC AAGATGGTAC GTGGCGGTTT TGTTTTGAAG GAGCTCCATT AACAGATTGC 
CATATGATTT TTTTATTAAA ATTATTAGGT AGAGAAAAAG AGATAGAACC GTTTGTAGAA 
AGAATAGCAT CACTCCAAAC AAATGAAGGA ACATGGAAAT TGTATGAAGA TGAAGTGGGA 
GGTAATTTAT CAGCTACCAT TCAATCTTAT GCCGCCTTAC TCGCATCGAA AAAATATACA 
AAAGAAGATG CGAATATGAA GCGAGCGGAA AATTTTATTA AGGAACGCGG AGGCGTGGCG 
CGTGCTCATT TTATGACGAA GTTTTTATTA GCAATTCATG GAGGATATGA ATATCCTTCA 
CTCTTTCATT TACCAACACC AATTATGTTT CTGCAAAATG ATTCCCCCCT CAGTATATTT 
GAATTGAGTA GCTCAGCGCG TATTCATTTA ATTCCGATGA TGTTGTGTTT AAATAAGAGA 
TTTCGAGTAG GGAAAAAGTT ATTGCCAAAT TTAAATCACA TTGCAGGCGG GGGCGGAGAA 
TGGTTTCGAG AAGATCGGTC TCCAGTTTTT CAAACGTTAA TAAGTGATGT AAAACAAATT 
ATATCGTATC CACTTTCGTT ACATCATAAA GGATATGAGG AAATAGAACG TTTTATGAAA 
GAGCGTATTG ATGAAAATGG AACGTTATAT AGTTACGCAA CTGCCTCGTT TTATATGATT 
TATGCTTTAC TCGCGTTAGG ACATTCTCCT CAATCATCAA TGATTCAAAA GGCTATAGCT 
GGGTTAACAT CTTATATATG GAAGATGGGA AGAGGGAGTC ATTTGCAAAA CTCTCCTTCA 
ACCGTGTGGG ATACAGCTTT ACTAAGCTAT GCGTTACAAG AGGCCCGCGT TTCAAAGGAT 
AATAAGATGA TTCAAAATGC AACAGCGTAT TTATTAAAAA AACAGCATAC AAAAAAAGCT 
GATTGGAGCG TACATGCTCC GGCGCTTATT CCTGGCGGTT GGGGTTTTTC AGATGTGAAT 
ACGACAATTC CAGATATAGA TGATACAACA GCTGTGCTAA GGGCATTGGC ACGAAGTAGA 
GGAAACAAAA ATATAGATAA TGCTTGGCAG AAAGGAGTCA ATTGGATTAA AGGATTACAA 
AATAATGATG GGGGCTGGGG AGCTTTTGAA AAAGGTGTGA CGAGCAAATT ATTAGCAAAT 
TTACCAATCG AAAATGCAAG TGATATGATT ACAGATCCTT CTACACCAGA TATTACAGGG 
AGAGTGTTAG AGTTTTTCGG GACGTATGCA CAAAACGGAT TGCCTGAGAA ACAAAAACAA 
AGTGCGATAA ATTGGTTAAT GAATGCACAA GAGGAAAATG GATCATGGTA TGGGAAATGG 
GGGATTTGTT ATATATATGG TACGTGGGCT GTTATGACAG GTTTACGGTC ACTCGGAATT 
CCGTCTAGCA ATCCATCATT GAAACGAGCA GCTTCATGGC TTGAATATAT ACAGCATGAA 
GATGGTGGTT GGGGAGAATC ATGCCACAGT AGTGTGGAGA AAAGGTTCGT TACTTTACCA 
TTTAGTACAC CATCCCAAAC TGCATGGGCG TTAGATGCTC TCATTTCTTA CTATGATACA 
GAAACGCCAG CTATTCGAAA AGGTGTTTCA TATTTGCTTT CGAATCCTTA TGTGAATGAA 
AGATATCCTA CTGGAACAGG TTTACCAGGT GCGTTTTATA TTAGATATCA TAGCTATGCC 
CATATATATC CACTACTTAC TTTAGCACAT TATTTAAAAA AATATAGAAA ATAA 

 

Protein sequence

MLLYEKVHEE IVRRATALQT MQWQDGTWRF CFEGAPLTDC HMIFLLKLLG REKEIEPFVE 
RIASLQTNEG TWKLYEDEVG GNLSATIQSY AALLASKKYT KEDANMKRAE NFIKERGGVA 
RAHFMTKFLL AIHGGYEYPS LFHLPTPIMF LQNDSPLSIF ELSSSARIHL IPMMLCLNKR 
FRVGKKLLPN LNHIAGGGGE WFREDRSPVF QTLISDVKQI ISYPLSLHHK GYEEIERFMK 
ERIDENGTLY SYATASFYMI YALLALGHSP QSSMIQKAIA GLTSYIWKMG RGSHLQNSPS 
TVWDTALLSY ALQEARVSKD NKMIQNATAY LLKKQHTKKA DWSVHAPALI PGGWGFSDVN 
TTIPDIDDTT AVLRALARSR GNKNIDNAWQ KGVNWIKGLQ NNDGGWGAFE KGVTSKLLAN 
LPIENASDMI TDPSTPDITG RVLEFFGTYA QNGLPEKQKQ SAINWLMNAQ EENGSWYGKW 
GICYIYGTWA VMTGLRSLGI PSSNPSLKRA ASWLEYIQHE DGGWGESCHS SVEKRFVTLP 
FSTPSQTAWA LDALISYYDT ETPAIRKGVS YLLSNPYVNE RYPTGTGLPG AFYIRYHSYA 
HIYPLLTLAH YLKKYRK